Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH4P55283 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH4P55283 AC139769.3-201ENST00000618383 175 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AC138907.10-201ENST00000623708 983 ntBASIC4.27□□□□□ -1.73
CDH4P55283 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH4P55283 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH4P55283 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH4P55283 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CDH4P55283 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH4P55283 AC026951.1-201ENST00000559530 2459 ntBASIC4.27□□□□□ -1.73
CDH4P55283 AC116667.1-201ENST00000604855 2072 ntBASIC4.26□□□□□ -1.73
CDH4P55283 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH4P55283 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH4P55283 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH4P55283 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 GCNT6-201ENST00000379591 934 ntBASIC4.26□□□□□ -1.73
CDH4P55283 ENSAP1-201ENST00000392855 326 ntBASIC4.26□□□□□ -1.73
CDH4P55283 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH4P55283 AL160275.2-201ENST00000412010 394 ntBASIC4.26□□□□□ -1.73
CDH4P55283 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.26□□□□□ -1.73
CDH4P55283 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 AC009965.2-201ENST00000425328 970 ntBASIC4.26□□□□□ -1.73
CDH4P55283 AC004975.1-201ENST00000428733 208 ntBASIC4.26□□□□□ -1.73
CDH4P55283 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH4P55283 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH4P55283 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH4P55283 RAD23BP3-201ENST00000454157 1152 ntBASIC4.26□□□□□ -1.73
CDH4P55283 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH4P55283 RPL36AP13-201ENST00000457490 317 ntBASIC4.26□□□□□ -1.73
CDH4P55283 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH4P55283 AC093267.1-201ENST00000489176 961 ntBASIC4.26□□□□□ -1.73
CDH4P55283 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH4P55283 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CDH4P55283 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH4P55283 MTCO1P35-201ENST00000515270 228 ntBASIC4.26□□□□□ -1.73
CDH4P55283 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH4P55283 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH4P55283 GLRXP2-201ENST00000555594 321 ntBASIC4.26□□□□□ -1.73
CDH4P55283 AC020910.2-201ENST00000603635 610 ntBASIC4.26□□□□□ -1.73
CDH4P55283 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH4P55283 MIR6715B-201ENST00000637172 77 ntBASIC4.26□□□□□ -1.73
CDH4P55283 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH4P55283 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 Z82217.1-201ENST00000625157 8149 ntBASIC4.26□□□□□ -1.73
CDH4P55283 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CDH4P55283 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CDH4P55283 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.26□□□□□ -1.73
CDH4P55283 AC087190.4-201ENST00000574616 8334 ntBASIC4.26□□□□□ -1.73
CDH4P55283 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH4P55283 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH4P55283 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH4P55283 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH4P55283 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 AC007390.2-201ENST00000606229 3803 ntBASIC4.25□□□□□ -1.73
CDH4P55283 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH4P55283 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH4P55283 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDH4P55283 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
CDH4P55283 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 RNA5SP317-201ENST00000410176 116 ntBASIC4.25□□□□□ -1.73
CDH4P55283 RNA5SP311-201ENST00000411290 116 ntBASIC4.25□□□□□ -1.73
CDH4P55283 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH4P55283 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.25□□□□□ -1.73
CDH4P55283 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 EIF2S2P3-201ENST00000428356 999 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AC073069.1-201ENST00000428657 441 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH4P55283 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 ELOCP3-201ENST00000439303 348 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AC006011.1-201ENST00000442758 349 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH4P55283 NUTF2P7-201ENST00000453086 375 ntBASIC4.25□□□□□ -1.73
CDH4P55283 RPL23AP12-201ENST00000467573 473 ntBASIC4.25□□□□□ -1.73
CDH4P55283 RPL7P1-201ENST00000468161 747 ntBASIC4.25□□□□□ -1.73
CDH4P55283 RPL7P9-201ENST00000468715 747 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AC068587.1-201ENST00000483613 781 ntBASIC4.25□□□□□ -1.73
CDH4P55283 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 AC093824.1-201ENST00000508796 343 ntBASIC4.25□□□□□ -1.73
CDH4P55283 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH4P55283 RNA5SP315-201ENST00000516340 116 ntBASIC4.25□□□□□ -1.73
CDH4P55283 RNA5SP312-201ENST00000517068 116 ntBASIC4.25□□□□□ -1.73
CDH4P55283 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH4P55283 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH4P55283 TOMM20P2-201ENST00000540082 421 ntBASIC4.25□□□□□ -1.73
CDH4P55283 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH4P55283 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH4P55283 AL121834.1-201ENST00000572284 509 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms