Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.67□□□□□ -1.66
LIMK1P53667 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
LIMK1P53667 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIMK1P53667 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LIMK1P53667 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIMK1P53667 MTCO1P18-201ENST00000455518 1419 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.67□□□□□ -1.66
LIMK1P53667 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.67□□□□□ -1.66
LIMK1P53667 METTL21EP-201ENST00000298105 713 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 SNORA70.4-201ENST00000365509 134 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AL590290.1-201ENST00000405336 380 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AC009237.10-201ENST00000414112 510 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AC009237.5-201ENST00000414271 501 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AL158825.1-201ENST00000414735 521 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 TCEA1P4-201ENST00000415066 844 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.67□□□□□ -1.66
LIMK1P53667 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.67□□□□□ -1.66
LIMK1P53667 AC112206.1-201ENST00000468416 477 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 AC005412.2-201ENST00000492004 341 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AC073358.1-201ENST00000505671 684 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.67□□□□□ -1.66
LIMK1P53667 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.67□□□□□ -1.66
LIMK1P53667 AC121161.1-201ENST00000510606 652 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 HMGN1P15-201ENST00000513870 295 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LIMK1P53667 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 AP001781.1-201ENST00000530977 207 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.67□□□□□ -1.66
LIMK1P53667 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIMK1P53667 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 OR4U1P-201ENST00000554958 912 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AC025884.1-201ENST00000556034 378 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 MIR3158-1-201ENST00000583596 81 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.67□□□□□ -1.66
LIMK1P53667 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.67□□□□□ -1.66
LIMK1P53667 AC073091.2-201ENST00000603205 907 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 IMMP1LP1-201ENST00000605170 488 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 U6.48-201ENST00000618523 106 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.67□□□□□ -1.66
LIMK1P53667 AC132825.7-201ENST00000638744 335 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIMK1P53667 AC126323.6-202ENST00000568092 3511 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.67□□□□□ -1.66
LIMK1P53667 OR11H5P-202ENST00000641612 1325 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIMK1P53667 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.67□□□□□ -1.66
LIMK1P53667 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
LIMK1P53667 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIMK1P53667 AL442639.1-201ENST00000625030 1899 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.66□□□□□ -1.66
LIMK1P53667 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIMK1P53667 ZFRP1-201ENST00000457579 2970 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LIMK1P53667 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LIMK1P53667 AL121657.1-201ENST00000327215 531 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LIMK1P53667 RNU6-481P-201ENST00000384194 107 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 ATP5F1P3-201ENST00000397213 657 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AL445183.3-201ENST00000414168 502 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 BX664727.1-201ENST00000416024 466 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.66□□□□□ -1.66
LIMK1P53667 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.66□□□□□ -1.66
LIMK1P53667 AL031736.2-201ENST00000426573 787 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AL512637.2-201ENST00000431287 1256 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 RPS6P12-201ENST00000432491 726 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.66□□□□□ -1.66
LIMK1P53667 RPL7P29-201ENST00000437151 728 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.66□□□□□ -1.66
LIMK1P53667 TPTE2P6-202ENST00000445572 1007 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 HSFY6P-201ENST00000445573 403 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 PHBP16-201ENST00000446318 950 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.66□□□□□ -1.66
LIMK1P53667 AC000111.2-201ENST00000448200 210 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.66□□□□□ -1.66
LIMK1P53667 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.66□□□□□ -1.66
LIMK1P53667 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.66□□□□□ -1.66
LIMK1P53667 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.66□□□□□ -1.66
LIMK1P53667 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.66□□□□□ -1.66
LIMK1P53667 SNORA31.9-201ENST00000516429 84 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.66□□□□□ -1.66
LIMK1P53667 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.66□□□□□ -1.66
LIMK1P53667 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LIMK1P53667 NDUFB4P11-201ENST00000560510 395 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.66□□□□□ -1.66
LIMK1P53667 MIR5699-201ENST00000578903 90 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.66□□□□□ -1.66
LIMK1P53667 AC067852.4-201ENST00000590314 478 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.66□□□□□ -1.66
LIMK1P53667 AC011374.2-201ENST00000607135 526 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 SNORD91B-202ENST00000608459 222 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AC112503.2-201ENST00000609005 552 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AP005229.2-201ENST00000609980 697 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AL133243.1-201ENST00000614487 366 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms