Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.2□□□□□ -1.58
COPAP53621 OR2AM1P-201ENST00000422137 422 ntBASIC5.2□□□□□ -1.58
COPAP53621 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.2□□□□□ -1.58
COPAP53621 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.2□□□□□ -1.58
COPAP53621 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.2□□□□□ -1.58
COPAP53621 AC073648.4-201ENST00000442655 781 ntBASIC5.2□□□□□ -1.58
COPAP53621 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.2□□□□□ -1.58
COPAP53621 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.2□□□□□ -1.58
COPAP53621 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 MRPL35P4-201ENST00000453682 566 ntBASIC5.2□□□□□ -1.58
COPAP53621 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.2□□□□□ -1.58
COPAP53621 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 RPL7P16-201ENST00000479738 738 ntBASIC5.2□□□□□ -1.58
COPAP53621 GAPDHP39-201ENST00000481866 979 ntBASIC5.2□□□□□ -1.58
COPAP53621 MTND2P14-201ENST00000482139 351 ntBASIC5.2□□□□□ -1.58
COPAP53621 IGLV2-34-201ENST00000490007 283 ntBASIC5.2□□□□□ -1.58
COPAP53621 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.2□□□□□ -1.58
COPAP53621 AADACP1-206ENST00000561502 1193 ntBASIC5.2□□□□□ -1.58
COPAP53621 MIR3912-201ENST00000577566 105 ntBASIC5.2□□□□□ -1.58
COPAP53621 MIR4666A-201ENST00000580160 79 ntBASIC5.2□□□□□ -1.58
COPAP53621 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.2□□□□□ -1.58
COPAP53621 AC011487.3-201ENST00000593607 453 ntBASIC5.2□□□□□ -1.58
COPAP53621 AC104785.1-201ENST00000603220 588 ntBASIC5.2□□□□□ -1.58
COPAP53621 AC013444.2-201ENST00000603317 787 ntBASIC5.2□□□□□ -1.58
COPAP53621 AL139344.1-201ENST00000605228 195 ntBASIC5.2□□□□□ -1.58
COPAP53621 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.2□□□□□ -1.58
COPAP53621 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.2□□□□□ -1.58
COPAP53621 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 CDRT1-208ENST00000630868 794 ntBASIC5.2□□□□□ -1.58
COPAP53621 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COPAP53621 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COPAP53621 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
COPAP53621 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 AC025263.3-201ENST00000622965 1396 ntBASIC5.19□□□□□ -1.58
COPAP53621 AC000123.3-201ENST00000624029 4975 ntBASIC5.19□□□□□ -1.58
COPAP53621 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COPAP53621 RNU6-1214P-201ENST00000363650 109 ntBASIC5.19□□□□□ -1.58
COPAP53621 RNU6-707P-201ENST00000364647 95 ntBASIC5.19□□□□□ -1.58
COPAP53621 SNORA56-201ENST00000383966 129 ntBASIC5.19□□□□□ -1.58
COPAP53621 RNA5SP87-201ENST00000384155 118 ntBASIC5.19□□□□□ -1.58
COPAP53621 SNORA51.12-201ENST00000384448 134 ntBASIC5.19□□□□□ -1.58
COPAP53621 SFR1P1-201ENST00000403720 688 ntBASIC5.19□□□□□ -1.58
COPAP53621 COX6B1P1-201ENST00000415962 213 ntBASIC5.19□□□□□ -1.58
COPAP53621 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 AL161722.2-201ENST00000434731 981 ntBASIC5.19□□□□□ -1.58
COPAP53621 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.19□□□□□ -1.58
COPAP53621 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.19□□□□□ -1.58
COPAP53621 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.19□□□□□ -1.58
COPAP53621 HMGB1P16-201ENST00000447155 540 ntBASIC5.19□□□□□ -1.58
COPAP53621 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 NDUFA5P9-201ENST00000472609 340 ntBASIC5.19□□□□□ -1.58
COPAP53621 RPL7P41-201ENST00000485823 957 ntBASIC5.19□□□□□ -1.58
COPAP53621 AC007686.1-201ENST00000488511 463 ntBASIC5.19□□□□□ -1.58
COPAP53621 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.19□□□□□ -1.58
COPAP53621 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.19□□□□□ -1.58
COPAP53621 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.19□□□□□ -1.58
COPAP53621 AC008562.1-201ENST00000521763 330 ntBASIC5.19□□□□□ -1.58
COPAP53621 BNIP3P1-201ENST00000547295 580 ntBASIC5.19□□□□□ -1.58
COPAP53621 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.19□□□□□ -1.58
COPAP53621 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 AL132657.2-201ENST00000564417 358 ntBASIC5.19□□□□□ -1.58
COPAP53621 AC022662.1-201ENST00000580252 331 ntBASIC5.19□□□□□ -1.58
COPAP53621 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.19□□□□□ -1.58
COPAP53621 AC115085.1-201ENST00000588924 229 ntBASIC5.19□□□□□ -1.58
COPAP53621 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.19□□□□□ -1.58
COPAP53621 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 AP005432.2-201ENST00000608162 586 ntBASIC5.19□□□□□ -1.58
COPAP53621 AC243654.2-201ENST00000612843 443 ntBASIC5.19□□□□□ -1.58
COPAP53621 MIR6798-201ENST00000612887 67 ntBASIC5.19□□□□□ -1.58
COPAP53621 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.19□□□□□ -1.58
COPAP53621 AC093783.1-201ENST00000612976 329 ntBASIC5.19□□□□□ -1.58
COPAP53621 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.19□□□□□ -1.58
COPAP53621 AC017037.3-201ENST00000625016 472 ntBASIC5.19□□□□□ -1.58
COPAP53621 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.19□□□□□ -1.58
COPAP53621 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.19□□□□□ -1.58
COPAP53621 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COPAP53621 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.19□□□□□ -1.58
COPAP53621 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 IRF5P1-201ENST00000504852 2164 ntBASIC5.19□□□□□ -1.58
COPAP53621 ZNF652P1-201ENST00000442420 1309 ntBASIC5.19□□□□□ -1.58
COPAP53621 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COPAP53621 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms