Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC244505.7-201ENST00000599675 272 ntBASIC5.46□□□□□ -1.54
MSH6P52701 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.46□□□□□ -1.54
MSH6P52701 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.46□□□□□ -1.54
MSH6P52701 AC090246.1-201ENST00000616499 426 ntBASIC5.46□□□□□ -1.54
MSH6P52701 MIR6852-201ENST00000621699 66 ntBASIC5.46□□□□□ -1.54
MSH6P52701 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.46□□□□□ -1.54
MSH6P52701 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
MSH6P52701 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MSH6P52701 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MSH6P52701 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
MSH6P52701 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
MSH6P52701 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.45□□□□□ -1.54
MSH6P52701 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MSH6P52701 AC234772.1-201ENST00000377927 937 ntBASIC5.45□□□□□ -1.54
MSH6P52701 MIR490-201ENST00000384865 128 ntBASIC5.45□□□□□ -1.54
MSH6P52701 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.45□□□□□ -1.54
MSH6P52701 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.45□□□□□ -1.54
MSH6P52701 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.45□□□□□ -1.54
MSH6P52701 RPS3AP46-201ENST00000448352 682 ntBASIC5.45□□□□□ -1.54
MSH6P52701 RPS4XP10-201ENST00000465034 731 ntBASIC5.45□□□□□ -1.54
MSH6P52701 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.45□□□□□ -1.54
MSH6P52701 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.45□□□□□ -1.54
MSH6P52701 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MSH6P52701 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.45□□□□□ -1.54
MSH6P52701 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.45□□□□□ -1.54
MSH6P52701 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.45□□□□□ -1.54
MSH6P52701 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.45□□□□□ -1.54
MSH6P52701 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.45□□□□□ -1.54
MSH6P52701 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MSH6P52701 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MSH6P52701 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.45□□□□□ -1.54
MSH6P52701 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
MSH6P52701 AC019072.1-201ENST00000604535 1551 ntBASIC5.45□□□□□ -1.54
MSH6P52701 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MSH6P52701 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.45□□□□□ -1.54
MSH6P52701 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.45□□□□□ -1.54
MSH6P52701 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
MSH6P52701 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH6P52701 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH6P52701 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.44□□□□□ -1.54
MSH6P52701 AC005008.1-201ENST00000456151 612 ntBASIC5.44□□□□□ -1.54
MSH6P52701 RPL21P11-201ENST00000461458 483 ntBASIC5.44□□□□□ -1.54
MSH6P52701 AL136126.1-201ENST00000473603 402 ntBASIC5.44□□□□□ -1.54
MSH6P52701 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH6P52701 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.44□□□□□ -1.54
MSH6P52701 AC007458.1-201ENST00000542812 373 ntBASIC5.44□□□□□ -1.54
MSH6P52701 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.44□□□□□ -1.54
MSH6P52701 SETP1-201ENST00000556014 845 ntBASIC5.44□□□□□ -1.54
MSH6P52701 NPM1P47-201ENST00000560843 856 ntBASIC5.44□□□□□ -1.54
MSH6P52701 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.44□□□□□ -1.54
MSH6P52701 AC241377.1-201ENST00000619797 406 ntBASIC5.44□□□□□ -1.54
MSH6P52701 AP005264.7-201ENST00000625003 745 ntBASIC5.44□□□□□ -1.54
MSH6P52701 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH6P52701 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH6P52701 AC244258.1-201ENST00000637553 1071 ntBASIC5.44□□□□□ -1.54
MSH6P52701 MTCO1P46-201ENST00000451639 1491 ntBASIC5.44□□□□□ -1.54
MSH6P52701 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH6P52701 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH6P52701 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH6P52701 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
MSH6P52701 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MSH6P52701 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.44□□□□□ -1.54
MSH6P52701 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSH6P52701 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
MSH6P52701 AC067945.1-201ENST00000342609 618 ntBASIC5.43□□□□□ -1.54
MSH6P52701 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH6P52701 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH6P52701 FABP3P2-201ENST00000453169 399 ntBASIC5.43□□□□□ -1.54
MSH6P52701 AC008155.2-201ENST00000464337 397 ntBASIC5.43□□□□□ -1.54
MSH6P52701 AC012158.1-204ENST00000483430 465 ntBASIC5.43□□□□□ -1.54
MSH6P52701 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.43□□□□□ -1.54
MSH6P52701 HIGD1AP18-201ENST00000520730 278 ntBASIC5.43□□□□□ -1.54
MSH6P52701 IGLV3-26-201ENST00000520756 302 ntBASIC5.43□□□□□ -1.54
MSH6P52701 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH6P52701 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSH6P52701 AC124068.1-201ENST00000563131 678 ntBASIC5.43□□□□□ -1.54
MSH6P52701 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH6P52701 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.43□□□□□ -1.54
MSH6P52701 AC012417.1-201ENST00000582307 1039 ntBASIC5.43□□□□□ -1.54
MSH6P52701 AC107993.1-201ENST00000591343 684 ntBASIC5.43□□□□□ -1.54
MSH6P52701 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.43□□□□□ -1.54
MSH6P52701 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.43□□□□□ -1.54
MSH6P52701 AC115621.1-201ENST00000604653 858 ntBASIC5.43□□□□□ -1.54
MSH6P52701 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.43□□□□□ -1.54
MSH6P52701 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSH6P52701 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSH6P52701 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH6P52701 AC012078.1-201ENST00000405035 1646 ntBASIC5.43□□□□□ -1.54
MSH6P52701 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSH6P52701 OR51C1P-202ENST00000641159 1444 ntBASIC5.43□□□□□ -1.54
MSH6P52701 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.43□□□□□ -1.54
MSH6P52701 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MSH6P52701 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.42□□□□□ -1.54
MSH6P52701 SKP1P3-201ENST00000429280 487 ntBASIC5.42□□□□□ -1.54
MSH6P52701 HIGD1AP4-201ENST00000430194 280 ntBASIC5.42□□□□□ -1.54
MSH6P52701 AC092641.1-201ENST00000440229 772 ntBASIC5.42□□□□□ -1.54
MSH6P52701 AC073387.1-201ENST00000453261 709 ntBASIC5.42□□□□□ -1.54
MSH6P52701 UBE2DNL-203ENST00000474922 222 ntBASIC5.42□□□□□ -1.54
MSH6P52701 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.42□□□□□ -1.54
MSH6P52701 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms