Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 RNU6-1227P-201ENST00000383981 107 ntBASIC6.44□□□□□ -1.38
USP11P51784 RNU6-1263P-201ENST00000384601 106 ntBASIC6.44□□□□□ -1.38
USP11P51784 RN7SKP59-201ENST00000410520 314 ntBASIC6.44□□□□□ -1.38
USP11P51784 RNU2-42P-201ENST00000410697 113 ntBASIC6.44□□□□□ -1.38
USP11P51784 RN7SKP293-201ENST00000411389 296 ntBASIC6.44□□□□□ -1.38
USP11P51784 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.44□□□□□ -1.38
USP11P51784 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.44□□□□□ -1.38
USP11P51784 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 PMCHL2-203ENST00000457791 237 ntBASIC6.44□□□□□ -1.38
USP11P51784 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.44□□□□□ -1.38
USP11P51784 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.44□□□□□ -1.38
USP11P51784 AC018710.1-201ENST00000506509 158 ntBASIC6.44□□□□□ -1.38
USP11P51784 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 RPL7L1P4-201ENST00000513004 707 ntBASIC6.44□□□□□ -1.38
USP11P51784 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 LRRC34P2-201ENST00000514850 553 ntBASIC6.44□□□□□ -1.38
USP11P51784 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 AC112191.2-201ENST00000522428 333 ntBASIC6.44□□□□□ -1.38
USP11P51784 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 AC087276.1-201ENST00000529659 480 ntBASIC6.44□□□□□ -1.38
USP11P51784 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.44□□□□□ -1.38
USP11P51784 AC125611.2-201ENST00000551907 647 ntBASIC6.44□□□□□ -1.38
USP11P51784 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.44□□□□□ -1.38
USP11P51784 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.44□□□□□ -1.38
USP11P51784 RPS3AP23-202ENST00000574601 686 ntBASIC6.44□□□□□ -1.38
USP11P51784 MIR4311-201ENST00000580794 100 ntBASIC6.44□□□□□ -1.38
USP11P51784 MIR4505-201ENST00000582238 73 ntBASIC6.44□□□□□ -1.38
USP11P51784 AP001429.1-201ENST00000602568 530 ntBASIC6.44□□□□□ -1.38
USP11P51784 AL139286.1-201ENST00000604465 483 ntBASIC6.44□□□□□ -1.38
USP11P51784 Y_RNA.812-201ENST00000610788 101 ntBASIC6.44□□□□□ -1.38
USP11P51784 AL359535.1-201ENST00000612100 1087 ntBASIC6.44□□□□□ -1.38
USP11P51784 RN7SL787P-201ENST00000613000 284 ntBASIC6.44□□□□□ -1.38
USP11P51784 Y_RNA.784-201ENST00000613803 101 ntBASIC6.44□□□□□ -1.38
USP11P51784 Y_RNA.787-201ENST00000616522 101 ntBASIC6.44□□□□□ -1.38
USP11P51784 Y_RNA.780-201ENST00000617336 101 ntBASIC6.44□□□□□ -1.38
USP11P51784 Y_RNA.801-201ENST00000619005 101 ntBASIC6.44□□□□□ -1.38
USP11P51784 AC136475.10-201ENST00000620253 385 ntBASIC6.44□□□□□ -1.38
USP11P51784 AC002550.2-201ENST00000621246 394 ntBASIC6.44□□□□□ -1.38
USP11P51784 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
USP11P51784 AC000095.2-202ENST00000637415 154 ntBASIC6.44□□□□□ -1.38
USP11P51784 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
USP11P51784 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.44□□□□□ -1.38
USP11P51784 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.44□□□□□ -1.38
USP11P51784 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.43□□□□□ -1.38
USP11P51784 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USP11P51784 LINC02019-201ENST00000608605 2060 ntBASIC6.43□□□□□ -1.38
USP11P51784 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
USP11P51784 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.43□□□□□ -1.38
USP11P51784 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USP11P51784 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USP11P51784 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
USP11P51784 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USP11P51784 Y_RNA.326-201ENST00000365176 113 ntBASIC6.43□□□□□ -1.38
USP11P51784 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
USP11P51784 AL590004.1-201ENST00000405321 300 ntBASIC6.43□□□□□ -1.38
USP11P51784 GAPDHP42-201ENST00000406848 981 ntBASIC6.43□□□□□ -1.38
USP11P51784 RNA5SP178-201ENST00000410380 128 ntBASIC6.43□□□□□ -1.38
USP11P51784 AL596448.1-201ENST00000415024 392 ntBASIC6.43□□□□□ -1.38
USP11P51784 AL354751.2-201ENST00000415471 210 ntBASIC6.43□□□□□ -1.38
USP11P51784 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.43□□□□□ -1.38
USP11P51784 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.43□□□□□ -1.38
USP11P51784 USP9YP13-201ENST00000417797 480 ntBASIC6.43□□□□□ -1.38
USP11P51784 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USP11P51784 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.43□□□□□ -1.38
USP11P51784 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 FMO7P-201ENST00000436045 768 ntBASIC6.43□□□□□ -1.38
USP11P51784 NDUFA5P4-201ENST00000436704 385 ntBASIC6.43□□□□□ -1.38
USP11P51784 PA2G4P6-201ENST00000438325 1197 ntBASIC6.43□□□□□ -1.38
USP11P51784 AP000281.1-201ENST00000444036 316 ntBASIC6.43□□□□□ -1.38
USP11P51784 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.43□□□□□ -1.38
USP11P51784 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 AL033528.1-201ENST00000453780 140 ntBASIC6.43□□□□□ -1.38
USP11P51784 HSPE1P22-201ENST00000456856 327 ntBASIC6.43□□□□□ -1.38
USP11P51784 SETP20-201ENST00000457046 852 ntBASIC6.43□□□□□ -1.38
USP11P51784 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.43□□□□□ -1.38
USP11P51784 AC104109.1-201ENST00000498563 436 ntBASIC6.43□□□□□ -1.38
USP11P51784 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 AC104108.1-201ENST00000509930 412 ntBASIC6.43□□□□□ -1.38
USP11P51784 RNU6-416P-201ENST00000516265 103 ntBASIC6.43□□□□□ -1.38
USP11P51784 IGLV3-24-201ENST00000517477 197 ntBASIC6.43□□□□□ -1.38
USP11P51784 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms