Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL445437.1-201ENST00000623157 3087 ntBASIC4.4□□□□□ -1.71
CASP4P49662 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CASP4P49662 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CASP4P49662 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.4□□□□□ -1.71
CASP4P49662 PHKBP1-201ENST00000450951 1951 ntBASIC4.4□□□□□ -1.71
CASP4P49662 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CASP4P49662 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CASP4P49662 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CASP4P49662 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASP4P49662 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CASP4P49662 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASP4P49662 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASP4P49662 AC009951.1-201ENST00000623674 2614 ntBASIC4.39□□□□□ -1.71
CASP4P49662 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.39□□□□□ -1.71
CASP4P49662 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASP4P49662 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CASP4P49662 AC011155.1-201ENST00000316512 456 ntBASIC4.39□□□□□ -1.71
CASP4P49662 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.39□□□□□ -1.71
CASP4P49662 SNORA70C-201ENST00000384538 135 ntBASIC4.39□□□□□ -1.71
CASP4P49662 AL022722.2-201ENST00000402519 180 ntBASIC4.39□□□□□ -1.71
CASP4P49662 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.39□□□□□ -1.71
CASP4P49662 AL691447.1-201ENST00000419456 387 ntBASIC4.39□□□□□ -1.71
CASP4P49662 GTF2IP2-201ENST00000424290 697 ntBASIC4.39□□□□□ -1.71
CASP4P49662 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.39□□□□□ -1.71
CASP4P49662 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.39□□□□□ -1.71
CASP4P49662 RPS20P1-201ENST00000434853 354 ntBASIC4.39□□□□□ -1.71
CASP4P49662 OR4C10P-201ENST00000434991 931 ntBASIC4.39□□□□□ -1.71
CASP4P49662 AC069285.2-201ENST00000440210 275 ntBASIC4.39□□□□□ -1.71
CASP4P49662 VN1R25P-201ENST00000443385 738 ntBASIC4.39□□□□□ -1.71
CASP4P49662 VN1R40P-201ENST00000455196 941 ntBASIC4.39□□□□□ -1.71
CASP4P49662 AC092691.2-201ENST00000461787 803 ntBASIC4.39□□□□□ -1.71
CASP4P49662 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CASP4P49662 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CASP4P49662 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.39□□□□□ -1.71
CASP4P49662 AC021146.7-201ENST00000509604 775 ntBASIC4.39□□□□□ -1.71
CASP4P49662 RNU6-491P-201ENST00000516099 110 ntBASIC4.39□□□□□ -1.71
CASP4P49662 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.39□□□□□ -1.71
CASP4P49662 AC090819.1-201ENST00000523800 1111 ntBASIC4.39□□□□□ -1.71
CASP4P49662 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.39□□□□□ -1.71
CASP4P49662 AC074029.2-201ENST00000551045 634 ntBASIC4.39□□□□□ -1.71
CASP4P49662 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.39□□□□□ -1.71
CASP4P49662 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.39□□□□□ -1.71
CASP4P49662 AC119674.1-220ENST00000641502 1048 ntBASIC4.39□□□□□ -1.71
CASP4P49662 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CASP4P49662 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CASP4P49662 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CASP4P49662 AC009313.2-201ENST00000417893 1941 ntBASIC4.38□□□□□ -1.71
CASP4P49662 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 MIR372-201ENST00000362225 67 ntBASIC4.38□□□□□ -1.71
CASP4P49662 ENSAP1-201ENST00000392855 326 ntBASIC4.38□□□□□ -1.71
CASP4P49662 RPS26P8-201ENST00000393490 348 ntBASIC4.38□□□□□ -1.71
CASP4P49662 HMGB3P19-201ENST00000403971 560 ntBASIC4.38□□□□□ -1.71
CASP4P49662 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 AC108032.1-201ENST00000416706 207 ntBASIC4.38□□□□□ -1.71
CASP4P49662 AC244453.4-201ENST00000419150 388 ntBASIC4.38□□□□□ -1.71
CASP4P49662 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.38□□□□□ -1.71
CASP4P49662 AC099336.2-201ENST00000422457 254 ntBASIC4.38□□□□□ -1.71
CASP4P49662 AL356806.1-201ENST00000422524 916 ntBASIC4.38□□□□□ -1.71
CASP4P49662 AC115285.1-201ENST00000424879 736 ntBASIC4.38□□□□□ -1.71
CASP4P49662 YY1P1-201ENST00000427625 668 ntBASIC4.38□□□□□ -1.71
CASP4P49662 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.38□□□□□ -1.71
CASP4P49662 AC011742.1-201ENST00000431448 434 ntBASIC4.38□□□□□ -1.71
CASP4P49662 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.38□□□□□ -1.71
CASP4P49662 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.38□□□□□ -1.71
CASP4P49662 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.38□□□□□ -1.71
CASP4P49662 AC099560.2-201ENST00000457554 255 ntBASIC4.38□□□□□ -1.71
CASP4P49662 RPS7P7-201ENST00000463499 571 ntBASIC4.38□□□□□ -1.71
CASP4P49662 AC010469.1-201ENST00000463864 576 ntBASIC4.38□□□□□ -1.71
CASP4P49662 RN7SL385P-201ENST00000468873 276 ntBASIC4.38□□□□□ -1.71
CASP4P49662 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.38□□□□□ -1.71
CASP4P49662 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.38□□□□□ -1.71
CASP4P49662 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.38□□□□□ -1.71
CASP4P49662 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.38□□□□□ -1.71
CASP4P49662 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.38□□□□□ -1.71
CASP4P49662 AL139395.1-201ENST00000603662 160 ntBASIC4.38□□□□□ -1.71
CASP4P49662 AP000255.1-201ENST00000610276 676 ntBASIC4.38□□□□□ -1.71
CASP4P49662 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.38□□□□□ -1.71
CASP4P49662 MIR492-201ENST00000638676 116 ntBASIC4.38□□□□□ -1.71
CASP4P49662 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CASP4P49662 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.38□□□□□ -1.71
CASP4P49662 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.38□□□□□ -1.71
CASP4P49662 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 AP000756.2-201ENST00000624168 2567 ntBASIC4.38□□□□□ -1.71
CASP4P49662 Z73965.1-201ENST00000623412 2297 ntBASIC4.38□□□□□ -1.71
CASP4P49662 AC068254.2-201ENST00000623938 3577 ntBASIC4.38□□□□□ -1.71
CASP4P49662 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CASP4P49662 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.38□□□□□ -1.71
CASP4P49662 AC097504.1-201ENST00000515103 2415 ntBASIC4.37□□□□□ -1.71
CASP4P49662 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CASP4P49662 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CASP4P49662 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CASP4P49662 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms