Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC025459.1-201ENST00000504072 156 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AK3P4-201ENST00000504283 583 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AC093720.1-201ENST00000505681 714 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 MTCO1P31-201ENST00000506355 492 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 IGKV2-36-201ENST00000519999 223 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CR1P49238 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC107016.1-201ENST00000550463 337 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AL121594.4-201ENST00000556211 1196 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC245128.3-201ENST00000594721 748 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC090948.1-201ENST00000607464 549 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CX3CR1P49238 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CX3CR1P49238 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CX3CR1P49238 AL137100.1-201ENST00000556703 1620 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AC092162.3-201ENST00000624511 1624 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
CX3CR1P49238 RNU1-87P-201ENST00000363727 170 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CX3CR1P49238 RNA5SP332-201ENST00000391063 115 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 RPL23AP59-201ENST00000399415 461 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AL589655.1-201ENST00000405398 482 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AL603766.1-201ENST00000407763 664 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 AC092647.1-201ENST00000420654 287 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 MTND2P21-201ENST00000436242 1042 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 RPL23AP89-201ENST00000439324 255 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 AL512326.1-201ENST00000443050 721 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 TPTE2P6-202ENST00000445572 1007 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 RPL23AP81-201ENST00000455252 467 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 RN7SL98P-201ENST00000462271 300 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 RN7SL585P-201ENST00000470538 280 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AP000926.1-201ENST00000479573 241 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 RPS29P19-201ENST00000479709 171 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 RN7SL810P-201ENST00000493031 276 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 AC022784.5-201ENST00000522241 437 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.71□□□□□ -1.82
CX3CR1P49238 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 ELOCP28-201ENST00000590044 317 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 PCNAP1-202ENST00000595299 752 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.71□□□□□ -1.82
CX3CR1P49238 AC010680.4-201ENST00000605334 543 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CR1P49238 AC242628.1-201ENST00000606810 391 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.71□□□□□ -1.82
CX3CR1P49238 MIR7702-201ENST00000621931 59 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 AC138907.10-201ENST00000623708 983 ntBASIC3.71□□□□□ -1.82
CX3CR1P49238 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CX3CR1P49238 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.71□□□□□ -1.82
CX3CR1P49238 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CR1P49238 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CX3CR1P49238 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 RNU6-398P-201ENST00000384143 109 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 ZNF603P-201ENST00000405613 487 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 RNA5SP306-201ENST00000411087 107 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 RNU4-74P-201ENST00000411280 161 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 AC004022.2-201ENST00000413824 193 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CR1P49238 RBMY2KP-201ENST00000418221 992 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 MFSD13B-201ENST00000420133 1290 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms