Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX2P48431 AC025574.1-201ENST00000554784 1653 ntBASIC4.54□□□□□ -1.68
SOX2P48431 AL390237.1-201ENST00000404226 1415 ntBASIC4.54□□□□□ -1.68
SOX2P48431 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
SOX2P48431 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX2P48431 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
SOX2P48431 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SOX2P48431 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SOX2P48431 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SOX2P48431 U3.32-201ENST00000408116 212 ntBASIC4.53□□□□□ -1.68
SOX2P48431 RNU2-65P-201ENST00000410162 185 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 AC093155.2-201ENST00000420734 937 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.53□□□□□ -1.68
SOX2P48431 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.53□□□□□ -1.68
SOX2P48431 SUMO2P3-201ENST00000438311 288 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 NPM1P39-201ENST00000449818 867 ntBASIC4.53□□□□□ -1.68
SOX2P48431 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 AC091180.1-201ENST00000462104 372 ntBASIC4.53□□□□□ -1.68
SOX2P48431 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.53□□□□□ -1.68
SOX2P48431 RN7SL170P-201ENST00000487098 295 ntBASIC4.53□□□□□ -1.68
SOX2P48431 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.53□□□□□ -1.68
SOX2P48431 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AC093281.2-201ENST00000510153 597 ntBASIC4.53□□□□□ -1.68
SOX2P48431 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.53□□□□□ -1.68
SOX2P48431 MTCO1P30-201ENST00000515244 580 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 AC105031.1-201ENST00000518550 476 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 SMARCE1P4-201ENST00000523647 241 ntBASIC4.53□□□□□ -1.68
SOX2P48431 OR5AK1P-201ENST00000524837 922 ntBASIC4.53□□□□□ -1.68
SOX2P48431 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 AP005262.1-201ENST00000582646 997 ntBASIC4.53□□□□□ -1.68
SOX2P48431 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX2P48431 AC008814.1-201ENST00000603797 406 ntBASIC4.53□□□□□ -1.68
SOX2P48431 RN7SKP299-201ENST00000606679 301 ntBASIC4.53□□□□□ -1.68
SOX2P48431 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 AC000068.2-201ENST00000608816 460 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AC013562.2-201ENST00000611632 603 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AC243654.2-201ENST00000612843 443 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AC118658.2-201ENST00000618697 459 ntBASIC4.53□□□□□ -1.68
SOX2P48431 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AC116563.2-201ENST00000624751 535 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.53□□□□□ -1.68
SOX2P48431 AC127502.3-201ENST00000636170 1206 ntBASIC4.53□□□□□ -1.68
SOX2P48431 ZNF833P-201ENST00000424938 1494 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AL022393.1-201ENST00000625142 1677 ntBASIC4.53□□□□□ -1.68
SOX2P48431 CASC19-204ENST00000641001 2055 ntBASIC4.53□□□□□ -1.68
SOX2P48431 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 AC073429.2-201ENST00000569694 1444 ntBASIC4.53□□□□□ -1.68
SOX2P48431 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX2P48431 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX2P48431 MTND4P34-201ENST00000572715 1371 ntBASIC4.53□□□□□ -1.69
SOX2P48431 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SOX2P48431 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
SOX2P48431 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX2P48431 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.52□□□□□ -1.69
SOX2P48431 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX2P48431 Y_RNA.18-201ENST00000362461 102 ntBASIC4.52□□□□□ -1.69
SOX2P48431 Y_RNA.194-201ENST00000363985 102 ntBASIC4.52□□□□□ -1.69
SOX2P48431 RNA5SP122-201ENST00000384457 108 ntBASIC4.52□□□□□ -1.69
SOX2P48431 MT-TH-201ENST00000387441 69 ntBASIC4.52□□□□□ -1.69
SOX2P48431 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SOX2P48431 OR8V1P-201ENST00000395193 873 ntBASIC4.52□□□□□ -1.69
SOX2P48431 RNA5SP487-201ENST00000410186 122 ntBASIC4.52□□□□□ -1.69
SOX2P48431 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX2P48431 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.52□□□□□ -1.69
SOX2P48431 NPM1P11-201ENST00000417106 855 ntBASIC4.52□□□□□ -1.69
SOX2P48431 BOLA3P4-201ENST00000418151 400 ntBASIC4.52□□□□□ -1.69
SOX2P48431 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX2P48431 IFNNP1-201ENST00000429219 553 ntBASIC4.52□□□□□ -1.69
SOX2P48431 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms