Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 EEF1A1P1-201ENST00000447052 739 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 AC005229.2-201ENST00000456995 399 ntBASIC3.9□□□□□ -1.79
RFC3P40938 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 AC012158.1-204ENST00000483430 465 ntBASIC3.9□□□□□ -1.79
RFC3P40938 RPS26P15-201ENST00000488067 348 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AF213884.1-201ENST00000488102 463 ntBASIC3.9□□□□□ -1.79
RFC3P40938 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.9□□□□□ -1.79
RFC3P40938 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.9□□□□□ -1.79
RFC3P40938 AC021146.7-201ENST00000509604 775 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC006499.6-201ENST00000511169 607 ntBASIC3.9□□□□□ -1.79
RFC3P40938 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFC3P40938 ACTR6P1-201ENST00000514311 1104 ntBASIC3.9□□□□□ -1.79
RFC3P40938 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 AC135001.1-201ENST00000544546 283 ntBASIC3.9□□□□□ -1.79
RFC3P40938 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 AL352979.3-201ENST00000553515 247 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 EIF1AXP2-201ENST00000555940 413 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.9□□□□□ -1.79
RFC3P40938 AGGF1P6-201ENST00000569213 976 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.9□□□□□ -1.79
RFC3P40938 MIR1254-2-201ENST00000579553 63 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.9□□□□□ -1.79
RFC3P40938 AC010201.1-201ENST00000605051 540 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AL109618.2-201ENST00000605527 211 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AL645927.2-201ENST00000618350 349 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AL391597.1-201ENST00000618707 694 ntBASIC3.9□□□□□ -1.79
RFC3P40938 MIR8059-201ENST00000620427 81 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AC103858.2-201ENST00000621471 543 ntBASIC3.9□□□□□ -1.79
RFC3P40938 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.9□□□□□ -1.79
RFC3P40938 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.9□□□□□ -1.79
RFC3P40938 MIR6715B-201ENST00000637172 77 ntBASIC3.9□□□□□ -1.79
RFC3P40938 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RFC3P40938 AC027287.1-201ENST00000553115 1453 ntBASIC3.9□□□□□ -1.79
RFC3P40938 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFC3P40938 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFC3P40938 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFC3P40938 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFC3P40938 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFC3P40938 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFC3P40938 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
RFC3P40938 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 AP001486.2-201ENST00000561652 5113 ntBASIC3.89□□□□□ -1.79
RFC3P40938 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.89□□□□□ -1.79
RFC3P40938 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 MIR92A2-201ENST00000385299 75 ntBASIC3.89□□□□□ -1.79
RFC3P40938 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RFC3P40938 MIR921-201ENST00000401133 56 ntBASIC3.89□□□□□ -1.79
RFC3P40938 GSTA12P-201ENST00000402398 508 ntBASIC3.89□□□□□ -1.79
RFC3P40938 RNU6-628P-201ENST00000410675 107 ntBASIC3.89□□□□□ -1.79
RFC3P40938 MIR1911-201ENST00000410783 80 ntBASIC3.89□□□□□ -1.79
RFC3P40938 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.89□□□□□ -1.79
RFC3P40938 TRGV6-201ENST00000417928 299 ntBASIC3.89□□□□□ -1.79
RFC3P40938 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 AL132765.1-201ENST00000434165 553 ntBASIC3.89□□□□□ -1.79
RFC3P40938 KCTD10P1-201ENST00000434203 625 ntBASIC3.89□□□□□ -1.79
RFC3P40938 IFNWP4-201ENST00000453148 294 ntBASIC3.89□□□□□ -1.79
RFC3P40938 CDH12P2-201ENST00000504393 298 ntBASIC3.89□□□□□ -1.79
RFC3P40938 KCTD9P2-201ENST00000512203 1013 ntBASIC3.89□□□□□ -1.79
RFC3P40938 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.89□□□□□ -1.79
RFC3P40938 AC008694.2-201ENST00000517591 306 ntBASIC3.89□□□□□ -1.79
RFC3P40938 OR7E10P-201ENST00000526420 991 ntBASIC3.89□□□□□ -1.79
RFC3P40938 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.89□□□□□ -1.79
RFC3P40938 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 RN7SL600P-201ENST00000581811 299 ntBASIC3.89□□□□□ -1.79
RFC3P40938 HMGB2P1-201ENST00000591146 634 ntBASIC3.89□□□□□ -1.79
RFC3P40938 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.89□□□□□ -1.79
RFC3P40938 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 AC016957.2-201ENST00000616998 848 ntBASIC3.89□□□□□ -1.79
RFC3P40938 RNA5SP196-201ENST00000625967 102 ntBASIC3.89□□□□□ -1.79
RFC3P40938 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.89□□□□□ -1.79
RFC3P40938 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RFC3P40938 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.89□□□□□ -1.79
RFC3P40938 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.89□□□□□ -1.79
RFC3P40938 MAPK10-253ENST00000641010 4072 ntBASIC3.89□□□□□ -1.79
RFC3P40938 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFC3P40938 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFC3P40938 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms