Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC026368.1-201ENST00000614934 690 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHMT2P34897 MIR4727-201ENST00000622232 55 ntBASIC4.07□□□□□ -1.76
SHMT2P34897 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SHMT2P34897 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.07□□□□□ -1.76
SHMT2P34897 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHMT2P34897 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHMT2P34897 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.07□□□□□ -1.76
SHMT2P34897 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHMT2P34897 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHMT2P34897 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SHMT2P34897 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SHMT2P34897 AC010329.2-201ENST00000595195 2737 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 OR11H5P-202ENST00000641612 1325 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 AL034374.1-201ENST00000406329 351 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.06□□□□□ -1.76
SHMT2P34897 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.06□□□□□ -1.76
SHMT2P34897 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.06□□□□□ -1.76
SHMT2P34897 AC091390.1-201ENST00000433904 331 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 CACYBPP1-201ENST00000438592 684 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 RPL23AP89-201ENST00000439324 255 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 AP002345.1-201ENST00000456493 928 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 RPL7P19-201ENST00000469948 618 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 AF213884.1-201ENST00000488102 463 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.06□□□□□ -1.76
SHMT2P34897 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.06□□□□□ -1.76
SHMT2P34897 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.06□□□□□ -1.76
SHMT2P34897 PRELID3BP5-201ENST00000508612 460 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 RNU6-760P-201ENST00000516078 97 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 NPM1P35-201ENST00000533043 868 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.06□□□□□ -1.76
SHMT2P34897 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.06□□□□□ -1.76
SHMT2P34897 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.06□□□□□ -1.76
SHMT2P34897 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.06□□□□□ -1.76
SHMT2P34897 AC068020.1-201ENST00000594215 661 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 MIMT1-201ENST00000597105 1050 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.06□□□□□ -1.76
SHMT2P34897 AC092653.1-201ENST00000608509 531 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHMT2P34897 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.06□□□□□ -1.76
SHMT2P34897 MIR7702-201ENST00000621931 59 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 AC090506.2-201ENST00000624521 419 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.06□□□□□ -1.76
SHMT2P34897 MIR6715B-201ENST00000637172 77 ntBASIC4.06□□□□□ -1.76
SHMT2P34897 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHMT2P34897 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHMT2P34897 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHMT2P34897 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHMT2P34897 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SHMT2P34897 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.06□□□□□ -1.76
SHMT2P34897 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.06□□□□□ -1.76
SHMT2P34897 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHMT2P34897 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.06□□□□□ -1.76
SHMT2P34897 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHMT2P34897 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHMT2P34897 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.05□□□□□ -1.76
SHMT2P34897 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.05□□□□□ -1.76
SHMT2P34897 OR5T3-201ENST00000303059 1023 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SHMT2P34897 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHMT2P34897 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHMT2P34897 NPM1P10-201ENST00000398310 865 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 AL022722.2-201ENST00000402519 180 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 RPS27AP11-201ENST00000402798 447 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 RPL23AP48-201ENST00000406913 488 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHMT2P34897 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.05□□□□□ -1.76
SHMT2P34897 AL353898.1-201ENST00000444055 238 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 AC114755.5-201ENST00000447760 831 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 AL627224.1-201ENST00000448334 444 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 RPL7AP52-201ENST00000458096 790 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 IGBP1P5-201ENST00000507524 1000 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.05□□□□□ -1.76
SHMT2P34897 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.05□□□□□ -1.76
SHMT2P34897 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.05□□□□□ -1.76
SHMT2P34897 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.05□□□□□ -1.76
SHMT2P34897 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHMT2P34897 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.05□□□□□ -1.76
SHMT2P34897 AC063950.1-201ENST00000552036 308 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 AC025884.1-201ENST00000556034 378 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 AC027176.2-201ENST00000559166 746 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.05□□□□□ -1.76
SHMT2P34897 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.05□□□□□ -1.76
SHMT2P34897 HNRNPCP4-201ENST00000571636 900 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 AC022655.2-201ENST00000577280 318 ntBASIC4.05□□□□□ -1.76
SHMT2P34897 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.05□□□□□ -1.76
SHMT2P34897 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.05□□□□□ -1.76
SHMT2P34897 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHMT2P34897 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.05□□□□□ -1.76
SHMT2P34897 AC090948.2-201ENST00000607363 564 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms