Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MTND5P11-201ENST00000511037 1812 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXC13P31276 ERCC6-202ENST00000374127 1782 ntBASIC4.8□□□□□ -1.64
HOXC13P31276 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC13P31276 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC13P31276 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
HOXC13P31276 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC13P31276 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 AL121657.1-201ENST00000327215 531 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 RNA5SP502-201ENST00000362694 119 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 AL080315.1-201ENST00000406055 466 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 UBE2V1P11-201ENST00000411559 285 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC13P31276 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC13P31276 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC13P31276 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC13P31276 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC13P31276 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXC13P31276 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC13P31276 PPIAP3-201ENST00000450588 505 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 Z95152.1-201ENST00000453556 656 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 AC018635.1-201ENST00000468292 1030 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 AC007537.2-201ENST00000472093 511 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC13P31276 AC110792.2-201ENST00000510278 224 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXC13P31276 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC13P31276 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC13P31276 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC13P31276 AC092451.2-201ENST00000538746 658 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC13P31276 CENPUP2-201ENST00000555897 1186 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC13P31276 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC13P31276 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC13P31276 AC008782.1-201ENST00000603386 430 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 AC079880.2-201ENST00000603790 1213 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC13P31276 AP003117.2-201ENST00000606010 545 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 AC114781.5-201ENST00000615297 108 ntBASIC4.79□□□□□ -1.64
HOXC13P31276 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC13P31276 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC13P31276 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC13P31276 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
HOXC13P31276 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 MTCO1P14-201ENST00000441695 1559 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXC13P31276 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXC13P31276 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 MIR921-201ENST00000401133 56 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC13P31276 PRELID3BP11-201ENST00000414230 479 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC13P31276 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC13P31276 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC13P31276 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 AC133473.1-201ENST00000455173 299 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 SCARNA10-201ENST00000459255 330 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 SNORD108-201ENST00000459332 71 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXC13P31276 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC13P31276 MTND4LP2-201ENST00000502312 285 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC13P31276 MTND3P3-201ENST00000505004 126 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC13P31276 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC13P31276 AC138701.1-201ENST00000524329 714 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC13P31276 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC13P31276 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC13P31276 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC13P31276 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC13P31276 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 AC027455.1-201ENST00000574104 594 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 AC092474.3-201ENST00000603022 568 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 AC005034.4-201ENST00000603612 899 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 AC011374.2-201ENST00000607135 526 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms