Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MAPK10-372ENST00000641954 3413 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HOXA9P31269 AC018529.3-201ENST00000624212 2254 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 MIR200C-201ENST00000384980 68 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXA9P31269 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXA9P31269 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 MTND4LP13-201ENST00000425022 298 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 SEC63P1-201ENST00000425785 1258 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 OR5BE1P-201ENST00000425977 939 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AC006946.1-201ENST00000429106 328 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 ARL4AP4-201ENST00000434170 518 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 RPS4XP4-201ENST00000443195 763 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXA9P31269 AL500522.2-201ENST00000448562 343 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXA9P31269 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXA9P31269 RPL29P14-201ENST00000495837 428 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AP001960.1-201ENST00000506494 658 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 PAICSP4-201ENST00000517543 1253 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXA9P31269 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 TRAV11-201ENST00000539512 339 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXA9P31269 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXA9P31269 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXA9P31269 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXA9P31269 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXA9P31269 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXA9P31269 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXA9P31269 MIR6868-201ENST00000611215 58 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AL138721.1-201ENST00000616756 179 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AL669942.2-201ENST00000620352 697 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXA9P31269 AC067852.7-201ENST00000623270 535 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 AP005264.7-201ENST00000625003 745 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 OR5BE1P-202ENST00000641168 1176 ntBASIC4.28□□□□□ -1.72
HOXA9P31269 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXA9P31269 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXA9P31269 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA9P31269 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA9P31269 AC092079.1-201ENST00000558620 1985 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA9P31269 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXA9P31269 AL121834.1-202ENST00000404494 277 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 RNU6-603P-201ENST00000411403 107 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXA9P31269 GSTM3P2-201ENST00000412746 530 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXA9P31269 OR2X1P-201ENST00000421144 687 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 SKP1P3-201ENST00000429280 487 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXA9P31269 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA9P31269 RAD23BP3-201ENST00000454157 1152 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 snoU13.22-201ENST00000459428 104 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 AC092691.2-201ENST00000461787 803 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 AL139099.1-201ENST00000497398 403 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXA9P31269 RN7SKP141-201ENST00000516167 338 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA9P31269 OR8X1P-201ENST00000534542 869 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 AC091516.1-201ENST00000549191 703 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA9P31269 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA9P31269 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA9P31269 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXA9P31269 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXA9P31269 OR6R2P-201ENST00000609216 300 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 CR392039.5-201ENST00000623201 510 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA9P31269 AC012442.3-202ENST00000636742 206 ntBASIC4.27□□□□□ -1.73
HOXA9P31269 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXA9P31269 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA9P31269 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HOXA9P31269 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HOXA9P31269 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXA9P31269 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA9P31269 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA9P31269 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
HOXA9P31269 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA9P31269 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HOXA9P31269 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA9P31269 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA9P31269 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HOXA9P31269 RNU6-1279P-201ENST00000383917 103 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA9P31269 AL160275.2-201ENST00000412010 394 ntBASIC4.26□□□□□ -1.73
HOXA9P31269 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA9P31269 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms