Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.26□□□□□ -1.57
TM4SF1P30408 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 SNORA9-201ENST00000384215 133 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.26□□□□□ -1.57
TM4SF1P30408 OR2AH1P-201ENST00000425717 928 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 UBE2D3P3-201ENST00000426992 425 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 MTCO1P52-201ENST00000433928 531 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.26□□□□□ -1.57
TM4SF1P30408 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 RPL7P48-201ENST00000461513 746 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 AF213884.1-201ENST00000488102 463 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.26□□□□□ -1.57
TM4SF1P30408 AC006499.6-201ENST00000511169 607 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.26□□□□□ -1.57
TM4SF1P30408 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 AC006064.5-201ENST00000541782 248 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.26□□□□□ -1.57
TM4SF1P30408 AC027455.1-201ENST00000574104 594 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AC005014.3-201ENST00000605985 190 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 Z98200.1-201ENST00000607298 470 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AC016542.1-201ENST00000608259 493 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AC018926.1-201ENST00000616335 435 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AL121890.2-201ENST00000617644 465 ntBASIC5.26□□□□□ -1.57
TM4SF1P30408 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.26□□□□□ -1.57
TM4SF1P30408 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.26□□□□□ -1.57
TM4SF1P30408 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.26□□□□□ -1.57
TM4SF1P30408 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF1P30408 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.26□□□□□ -1.57
TM4SF1P30408 AL731532.2-201ENST00000623542 1953 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF1P30408 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF1P30408 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF1P30408 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF1P30408 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.25□□□□□ -1.57
TM4SF1P30408 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TM4SF1P30408 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF1P30408 RNU6-252P-201ENST00000363232 107 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF1P30408 AL590704.1-201ENST00000402856 794 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 SNORA11C-201ENST00000408532 129 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 RNU4-6P-201ENST00000410804 122 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 AC048351.1-201ENST00000420064 602 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.25□□□□□ -1.57
TM4SF1P30408 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.25□□□□□ -1.57
TM4SF1P30408 NPM1P39-201ENST00000449818 867 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.25□□□□□ -1.57
TM4SF1P30408 ACTR3P3-201ENST00000480448 893 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF1P30408 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF1P30408 RN7SKP157-201ENST00000516174 282 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.25□□□□□ -1.57
TM4SF1P30408 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.25□□□□□ -1.57
TM4SF1P30408 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF1P30408 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF1P30408 AC022655.2-201ENST00000577280 318 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 AC005776.1-201ENST00000603164 290 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 AC096553.1-201ENST00000605169 829 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 AL133445.2-201ENST00000611191 527 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 MIR8084-201ENST00000614105 89 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 AP000943.4-201ENST00000622912 357 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 AC112198.2-201ENST00000426589 6996 ntBASIC5.25□□□□□ -1.57
TM4SF1P30408 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF1P30408 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF1P30408 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 SNORA62.2-201ENST00000364672 152 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TM4SF1P30408 RN7SKP167-201ENST00000411047 285 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.24□□□□□ -1.57
TM4SF1P30408 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 VN1R42P-201ENST00000424651 344 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF1P30408 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.24□□□□□ -1.57
TM4SF1P30408 RPL23AP25-201ENST00000430973 463 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF1P30408 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.24□□□□□ -1.57
TM4SF1P30408 RPS26P2-201ENST00000440331 348 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 AC002553.2-201ENST00000453217 340 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 SETP6-201ENST00000479329 568 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 RPL23AP37-201ENST00000479658 549 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF1P30408 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF1P30408 AL359219.2-201ENST00000555184 348 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms