Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 GAPDHP36-201ENST00000480688 918 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 ACTG1P13-201ENST00000486987 1043 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 RPL5P23-201ENST00000496040 868 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.92□□□□□ -1.46
CNGA1P29973 AC105313.1-201ENST00000509121 353 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.92□□□□□ -1.46
CNGA1P29973 AC010587.2-201ENST00000511727 448 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.92□□□□□ -1.46
CNGA1P29973 AC105185.1-201ENST00000518705 535 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.92□□□□□ -1.46
CNGA1P29973 OR5AN2P-201ENST00000534535 896 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 GCSHP4-201ENST00000538792 439 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.92□□□□□ -1.46
CNGA1P29973 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.92□□□□□ -1.46
CNGA1P29973 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNGA1P29973 AC017100.2-201ENST00000584628 355 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AC234771.5-201ENST00000600161 514 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AL031281.1-201ENST00000604049 488 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.92□□□□□ -1.46
CNGA1P29973 AC090246.1-201ENST00000616499 426 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AC243756.2-201ENST00000618406 463 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AP003072.4-201ENST00000624580 310 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 AC135068.12-201ENST00000637370 931 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
CNGA1P29973 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CNGA1P29973 AL034370.1-201ENST00000397254 1590 ntBASIC5.92□□□□□ -1.46
CNGA1P29973 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CNGA1P29973 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CNGA1P29973 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNGA1P29973 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CNGA1P29973 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNGA1P29973 AC009229.4-201ENST00000623854 1947 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 AC093849.1-201ENST00000563631 2209 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CNGA1P29973 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CNGA1P29973 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 RNU1-32P-201ENST00000363937 159 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 RNU6-621P-201ENST00000364752 109 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 RNU6-398P-201ENST00000384143 109 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 TAF9BP1-201ENST00000396646 746 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.91□□□□□ -1.46
CNGA1P29973 LUZP4P1-201ENST00000415420 344 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 PTP4A1P5-201ENST00000420305 455 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 EI24P4-201ENST00000423683 1078 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 RPL37P1-201ENST00000432310 284 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 RPS29P10-201ENST00000439197 166 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 MED28P3-201ENST00000444288 531 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.91□□□□□ -1.46
CNGA1P29973 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.91□□□□□ -1.46
CNGA1P29973 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 RPS4XP12-201ENST00000461747 709 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 RPL7P18-201ENST00000478965 734 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AC140172.1-201ENST00000502928 141 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AC021146.8-201ENST00000507455 733 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AC021193.1-201ENST00000511607 420 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.91□□□□□ -1.46
CNGA1P29973 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.91□□□□□ -1.46
CNGA1P29973 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.91□□□□□ -1.46
CNGA1P29973 AC109446.2-201ENST00000567872 497 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 OR4K7P-201ENST00000580232 945 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.91□□□□□ -1.46
CNGA1P29973 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 AL354760.1-201ENST00000608357 643 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AC131235.4-201ENST00000609288 620 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 AC012414.7-202ENST00000622705 1090 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AP000676.3-201ENST00000623299 569 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AC026422.1-201ENST00000623961 452 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 AL512506.2-201ENST00000624472 458 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
CNGA1P29973 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CNGA1P29973 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CNGA1P29973 PHKBP1-201ENST00000450951 1951 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 STX3-208ENST00000641815 3236 ntBASIC5.91□□□□□ -1.46
CNGA1P29973 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms