Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MRPS21P2-201ENST00000424704 264 ntBASIC6.91□□□□□ -1.3
RXRBP28702 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.91□□□□□ -1.3
RXRBP28702 RAB9AP5-201ENST00000437794 597 ntBASIC6.91□□□□□ -1.3
RXRBP28702 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 MTND1P30-201ENST00000441241 901 ntBASIC6.91□□□□□ -1.3
RXRBP28702 RAB9AP2-201ENST00000443911 597 ntBASIC6.91□□□□□ -1.3
RXRBP28702 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 GAPDHP36-201ENST00000480688 918 ntBASIC6.91□□□□□ -1.3
RXRBP28702 NCOR1P1-202ENST00000486162 291 ntBASIC6.91□□□□□ -1.3
RXRBP28702 AC147055.4-201ENST00000504399 745 ntBASIC6.91□□□□□ -1.3
RXRBP28702 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.91□□□□□ -1.3
RXRBP28702 SCARNA15.1-201ENST00000516384 125 ntBASIC6.91□□□□□ -1.3
RXRBP28702 RNU6-506P-201ENST00000516553 94 ntBASIC6.91□□□□□ -1.3
RXRBP28702 SNORA67.7-201ENST00000516664 135 ntBASIC6.91□□□□□ -1.3
RXRBP28702 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.91□□□□□ -1.3
RXRBP28702 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.91□□□□□ -1.3
RXRBP28702 AC064836.2-201ENST00000609491 462 ntBASIC6.91□□□□□ -1.3
RXRBP28702 AL138960.1-201ENST00000613838 513 ntBASIC6.91□□□□□ -1.3
RXRBP28702 Y_RNA.804-201ENST00000615262 101 ntBASIC6.91□□□□□ -1.3
RXRBP28702 AL357080.1-201ENST00000617394 239 ntBASIC6.91□□□□□ -1.3
RXRBP28702 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 AL033543.1-201ENST00000623440 13454 ntBASIC6.91□□□□□ -1.3
RXRBP28702 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 AC005618.1-201ENST00000606901 3148 ntBASIC6.91□□□□□ -1.3
RXRBP28702 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RXRBP28702 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.91□□□□□ -1.3
RXRBP28702 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.91□□□□□ -1.3
RXRBP28702 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
RXRBP28702 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.91□□□□□ -1.3
RXRBP28702 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RXRBP28702 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
RXRBP28702 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.9□□□□□ -1.3
RXRBP28702 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RXRBP28702 AC114774.1-201ENST00000507410 1770 ntBASIC6.9□□□□□ -1.3
RXRBP28702 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.9□□□□□ -1.3
RXRBP28702 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RXRBP28702 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RXRBP28702 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RXRBP28702 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RXRBP28702 RN7SKP224-201ENST00000364140 325 ntBASIC6.9□□□□□ -1.3
RXRBP28702 RN7SKP106-201ENST00000410832 272 ntBASIC6.9□□□□□ -1.3
RXRBP28702 AC098592.2-201ENST00000413158 265 ntBASIC6.9□□□□□ -1.3
RXRBP28702 AC027644.1-201ENST00000419595 298 ntBASIC6.9□□□□□ -1.3
RXRBP28702 AL358176.3-201ENST00000420757 454 ntBASIC6.9□□□□□ -1.3
RXRBP28702 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RXRBP28702 AL139421.1-201ENST00000423010 169 ntBASIC6.9□□□□□ -1.3
RXRBP28702 AL022400.1-201ENST00000423946 935 ntBASIC6.9□□□□□ -1.3
RXRBP28702 RPL21P43-201ENST00000425440 472 ntBASIC6.9□□□□□ -1.3
RXRBP28702 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RXRBP28702 NANOGNBP1-201ENST00000448444 480 ntBASIC6.9□□□□□ -1.3
RXRBP28702 RPL21P134-201ENST00000453468 483 ntBASIC6.9□□□□□ -1.3
RXRBP28702 AC016687.1-201ENST00000482574 353 ntBASIC6.9□□□□□ -1.3
RXRBP28702 AC058823.1-201ENST00000485315 474 ntBASIC6.9□□□□□ -1.3
RXRBP28702 RN7SKP276-201ENST00000516242 268 ntBASIC6.9□□□□□ -1.3
RXRBP28702 RNU6-678P-201ENST00000516832 109 ntBASIC6.9□□□□□ -1.3
RXRBP28702 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.9□□□□□ -1.3
RXRBP28702 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RXRBP28702 MIR4444-1-201ENST00000581696 74 ntBASIC6.9□□□□□ -1.3
RXRBP28702 MIR4444-2-201ENST00000584390 74 ntBASIC6.9□□□□□ -1.3
RXRBP28702 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.9□□□□□ -1.3
RXRBP28702 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.9□□□□□ -1.3
RXRBP28702 AC044792.1-201ENST00000593294 196 ntBASIC6.9□□□□□ -1.3
RXRBP28702 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.9□□□□□ -1.3
RXRBP28702 AC092354.1-201ENST00000606057 376 ntBASIC6.9□□□□□ -1.3
RXRBP28702 AC005021.1-201ENST00000608730 355 ntBASIC6.9□□□□□ -1.3
RXRBP28702 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RXRBP28702 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RXRBP28702 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RXRBP28702 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
RXRBP28702 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RXRBP28702 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.9□□□□□ -1.31
RXRBP28702 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
RXRBP28702 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RXRBP28702 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
RXRBP28702 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.9□□□□□ -1.31
RXRBP28702 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.9□□□□□ -1.31
RXRBP28702 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RXRBP28702 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.89□□□□□ -1.31
RXRBP28702 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.89□□□□□ -1.31
RXRBP28702 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
RXRBP28702 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
RXRBP28702 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RXRBP28702 RNU6-259P-201ENST00000383999 107 ntBASIC6.89□□□□□ -1.31
RXRBP28702 SNORA66-201ENST00000384792 133 ntBASIC6.89□□□□□ -1.31
RXRBP28702 MIR129-1-201ENST00000384972 72 ntBASIC6.89□□□□□ -1.31
RXRBP28702 FGF7P8-201ENST00000402994 292 ntBASIC6.89□□□□□ -1.31
RXRBP28702 RPSAP35-201ENST00000413753 818 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC138393.2-201ENST00000414742 246 ntBASIC6.89□□□□□ -1.31
RXRBP28702 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.89□□□□□ -1.31
RXRBP28702 USP9YP20-201ENST00000419224 558 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC016027.5-201ENST00000427227 210 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC000111.3-201ENST00000433478 193 ntBASIC6.89□□□□□ -1.31
RXRBP28702 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms