Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MIR6813-201ENST00000621638 56 ntBASIC6.85□□□□□ -1.31
VARSP26640 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.85□□□□□ -1.31
VARSP26640 PARP4P1-201ENST00000435945 2337 ntBASIC6.85□□□□□ -1.31
VARSP26640 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.85□□□□□ -1.31
VARSP26640 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 AC104837.1-201ENST00000444644 1587 ntBASIC6.85□□□□□ -1.31
VARSP26640 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.85□□□□□ -1.31
VARSP26640 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
VARSP26640 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
VARSP26640 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.84□□□□□ -1.31
VARSP26640 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 AL139384.2-201ENST00000613809 3590 ntBASIC6.84□□□□□ -1.31
VARSP26640 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 U3.12-201ENST00000364498 214 ntBASIC6.84□□□□□ -1.31
VARSP26640 RNU6-310P-201ENST00000384655 107 ntBASIC6.84□□□□□ -1.31
VARSP26640 Y_RNA.552-201ENST00000384665 112 ntBASIC6.84□□□□□ -1.31
VARSP26640 RPS3AP5-201ENST00000389400 821 ntBASIC6.84□□□□□ -1.31
VARSP26640 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
VARSP26640 RPL7P60-201ENST00000397636 735 ntBASIC6.84□□□□□ -1.31
VARSP26640 SSXP10-201ENST00000402595 565 ntBASIC6.84□□□□□ -1.31
VARSP26640 MIR548M-201ENST00000408260 86 ntBASIC6.84□□□□□ -1.31
VARSP26640 AL672212.1-201ENST00000422246 400 ntBASIC6.84□□□□□ -1.31
VARSP26640 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.84□□□□□ -1.31
VARSP26640 RPL7L1P10-201ENST00000427790 463 ntBASIC6.84□□□□□ -1.31
VARSP26640 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 PUDPP2-201ENST00000431423 643 ntBASIC6.84□□□□□ -1.31
VARSP26640 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.84□□□□□ -1.31
VARSP26640 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.84□□□□□ -1.31
VARSP26640 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.84□□□□□ -1.31
VARSP26640 SRP68P2-201ENST00000456184 254 ntBASIC6.84□□□□□ -1.31
VARSP26640 RPS20P21-201ENST00000466859 343 ntBASIC6.84□□□□□ -1.31
VARSP26640 RPL23AP71-201ENST00000470966 469 ntBASIC6.84□□□□□ -1.31
VARSP26640 AC026826.1-201ENST00000493002 361 ntBASIC6.84□□□□□ -1.31
VARSP26640 TRBVA-201ENST00000498804 316 ntBASIC6.84□□□□□ -1.31
VARSP26640 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.84□□□□□ -1.31
VARSP26640 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 Y_RNA.661-201ENST00000516003 99 ntBASIC6.84□□□□□ -1.31
VARSP26640 AC105031.1-201ENST00000518550 476 ntBASIC6.84□□□□□ -1.31
VARSP26640 AP003084.1-201ENST00000524828 742 ntBASIC6.84□□□□□ -1.31
VARSP26640 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.84□□□□□ -1.31
VARSP26640 AP000827.1-201ENST00000527814 258 ntBASIC6.84□□□□□ -1.31
VARSP26640 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.84□□□□□ -1.31
VARSP26640 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 AL592436.1-201ENST00000605135 558 ntBASIC6.84□□□□□ -1.31
VARSP26640 AC018889.1-201ENST00000605372 397 ntBASIC6.84□□□□□ -1.31
VARSP26640 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 AC006213.6-201ENST00000623722 4179 ntBASIC6.84□□□□□ -1.31
VARSP26640 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
VARSP26640 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VARSP26640 API5P2-201ENST00000397055 1498 ntBASIC6.84□□□□□ -1.31
VARSP26640 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
VARSP26640 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.84□□□□□ -1.31
VARSP26640 AC010401.2-201ENST00000575137 4934 ntBASIC6.84□□□□□ -1.31
VARSP26640 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.32
VARSP26640 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
VARSP26640 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
VARSP26640 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
VARSP26640 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.83□□□□□ -1.32
VARSP26640 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 MTND5P28-201ENST00000438005 1594 ntBASIC6.83□□□□□ -1.32
VARSP26640 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.83□□□□□ -1.32
VARSP26640 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms