Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC025175.1-201ENST00000606482 759 ntBASIC3.68□□□□□ -1.82
USF1P22415 AC017076.1-201ENST00000607613 578 ntBASIC3.68□□□□□ -1.82
USF1P22415 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USF1P22415 RMST_9.1-201ENST00000619945 193 ntBASIC3.68□□□□□ -1.82
USF1P22415 AL669942.2-201ENST00000620352 697 ntBASIC3.68□□□□□ -1.82
USF1P22415 MIR8059-201ENST00000620427 81 ntBASIC3.68□□□□□ -1.82
USF1P22415 AC007342.8-201ENST00000623278 678 ntBASIC3.68□□□□□ -1.82
USF1P22415 RNA5SP196-201ENST00000625967 102 ntBASIC3.68□□□□□ -1.82
USF1P22415 OR5AC4P-202ENST00000642086 985 ntBASIC3.68□□□□□ -1.82
USF1P22415 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USF1P22415 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.68□□□□□ -1.82
USF1P22415 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.68□□□□□ -1.82
USF1P22415 AC134882.1-201ENST00000603738 1676 ntBASIC3.68□□□□□ -1.82
USF1P22415 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USF1P22415 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF1P22415 LINC02471-203ENST00000641941 4752 ntBASIC3.67□□□□□ -1.82
USF1P22415 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
USF1P22415 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
USF1P22415 AL158163.1-201ENST00000603915 1649 ntBASIC3.67□□□□□ -1.82
USF1P22415 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USF1P22415 RNU1-13P-201ENST00000384499 162 ntBASIC3.67□□□□□ -1.82
USF1P22415 MIR3074-201ENST00000384885 81 ntBASIC3.67□□□□□ -1.82
USF1P22415 RNU6-244P-201ENST00000391028 104 ntBASIC3.67□□□□□ -1.82
USF1P22415 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF1P22415 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.67□□□□□ -1.82
USF1P22415 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USF1P22415 UBTFL3-201ENST00000418934 1024 ntBASIC3.67□□□□□ -1.82
USF1P22415 RWDD4P2-201ENST00000426392 563 ntBASIC3.67□□□□□ -1.82
USF1P22415 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.67□□□□□ -1.82
USF1P22415 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 EEF1A1P1-201ENST00000447052 739 ntBASIC3.67□□□□□ -1.82
USF1P22415 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.67□□□□□ -1.82
USF1P22415 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.67□□□□□ -1.82
USF1P22415 AC091153.1-201ENST00000466297 402 ntBASIC3.67□□□□□ -1.82
USF1P22415 UBTFL6-201ENST00000477929 1024 ntBASIC3.67□□□□□ -1.82
USF1P22415 RWDD4P1-201ENST00000488019 565 ntBASIC3.67□□□□□ -1.82
USF1P22415 RPL35P6-201ENST00000490024 372 ntBASIC3.67□□□□□ -1.82
USF1P22415 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USF1P22415 SNORD116-26-201ENST00000516006 96 ntBASIC3.67□□□□□ -1.82
USF1P22415 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.67□□□□□ -1.82
USF1P22415 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USF1P22415 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.67□□□□□ -1.82
USF1P22415 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USF1P22415 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 HNRNPCP4-201ENST00000571636 900 ntBASIC3.67□□□□□ -1.82
USF1P22415 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 AC011472.4-201ENST00000615848 491 ntBASIC3.67□□□□□ -1.82
USF1P22415 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USF1P22415 AC112484.5-201ENST00000624189 228 ntBASIC3.67□□□□□ -1.82
USF1P22415 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.67□□□□□ -1.82
USF1P22415 AL592437.2-201ENST00000421655 2434 ntBASIC3.67□□□□□ -1.82
USF1P22415 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
USF1P22415 ASNSP1-204ENST00000641977 1664 ntBASIC3.67□□□□□ -1.82
USF1P22415 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.67□□□□□ -1.82
USF1P22415 AL118496.1-201ENST00000440201 1812 ntBASIC3.67□□□□□ -1.82
USF1P22415 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.67□□□□□ -1.82
USF1P22415 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF1P22415 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF1P22415 AP001486.2-201ENST00000561652 5113 ntBASIC3.66□□□□□ -1.82
USF1P22415 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USF1P22415 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USF1P22415 AC139769.1-204ENST00000472297 1931 ntBASIC3.66□□□□□ -1.82
USF1P22415 LARP1BP1-201ENST00000506036 1359 ntBASIC3.66□□□□□ -1.82
USF1P22415 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.66□□□□□ -1.82
USF1P22415 AC017002.4-201ENST00000604721 1525 ntBASIC3.66□□□□□ -1.82
USF1P22415 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USF1P22415 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USF1P22415 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
USF1P22415 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
USF1P22415 MIR134-201ENST00000385258 73 ntBASIC3.66□□□□□ -1.82
USF1P22415 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
USF1P22415 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.66□□□□□ -1.82
USF1P22415 AC013404.1-201ENST00000413068 249 ntBASIC3.66□□□□□ -1.82
USF1P22415 AL450992.3-201ENST00000413192 568 ntBASIC3.66□□□□□ -1.82
USF1P22415 AL512504.1-201ENST00000415494 778 ntBASIC3.66□□□□□ -1.82
USF1P22415 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.66□□□□□ -1.82
USF1P22415 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.66□□□□□ -1.82
USF1P22415 AC044797.1-201ENST00000445744 679 ntBASIC3.66□□□□□ -1.82
USF1P22415 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.66□□□□□ -1.82
USF1P22415 RPS26P28-201ENST00000470806 348 ntBASIC3.66□□□□□ -1.82
USF1P22415 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.66□□□□□ -1.82
USF1P22415 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.66□□□□□ -1.82
USF1P22415 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.66□□□□□ -1.82
USF1P22415 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.66□□□□□ -1.82
USF1P22415 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.66□□□□□ -1.82
USF1P22415 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.66□□□□□ -1.82
USF1P22415 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.66□□□□□ -1.82
USF1P22415 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.66□□□□□ -1.82
USF1P22415 MED28P5-201ENST00000528254 438 ntBASIC3.66□□□□□ -1.82
USF1P22415 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
USF1P22415 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.66□□□□□ -1.82
USF1P22415 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.66□□□□□ -1.82
USF1P22415 MTND6P33-201ENST00000571794 183 ntBASIC3.66□□□□□ -1.82
USF1P22415 AL121834.1-201ENST00000572284 509 ntBASIC3.66□□□□□ -1.82
USF1P22415 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms