Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 FMO7P-201ENST00000436045 768 ntBASIC6.55□□□□□ -1.36
LIG1P18858 RPL12P11-201ENST00000439970 501 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.55□□□□□ -1.36
LIG1P18858 AC239367.2-201ENST00000447309 705 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 RPL7P31-201ENST00000450192 724 ntBASIC6.55□□□□□ -1.36
LIG1P18858 RN7SL197P-201ENST00000466981 299 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 DUTP1-201ENST00000493631 470 ntBASIC6.55□□□□□ -1.36
LIG1P18858 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.55□□□□□ -1.36
LIG1P18858 GLUD1P3-202ENST00000508551 200 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AC093824.1-201ENST00000508796 343 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 SCARNA18.1-201ENST00000516330 83 ntBASIC6.55□□□□□ -1.36
LIG1P18858 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 TRIM51DP-201ENST00000529746 596 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.55□□□□□ -1.36
LIG1P18858 AP004609.2-201ENST00000532177 190 ntBASIC6.55□□□□□ -1.36
LIG1P18858 PCNAP4-201ENST00000532690 730 ntBASIC6.55□□□□□ -1.36
LIG1P18858 NANOGNBP2-201ENST00000544753 553 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 AC009852.2-201ENST00000567898 485 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.55□□□□□ -1.36
LIG1P18858 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.55□□□□□ -1.36
LIG1P18858 VN1R79P-201ENST00000593540 513 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.55□□□□□ -1.36
LIG1P18858 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.55□□□□□ -1.36
LIG1P18858 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.55□□□□□ -1.36
LIG1P18858 AC138649.3-201ENST00000622154 254 ntBASIC6.55□□□□□ -1.36
LIG1P18858 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LIG1P18858 AC124864.2-201ENST00000624736 186 ntBASIC6.55□□□□□ -1.36
LIG1P18858 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.55□□□□□ -1.36
LIG1P18858 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LIG1P18858 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.55□□□□□ -1.36
LIG1P18858 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LIG1P18858 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIG1P18858 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.55□□□□□ -1.36
LIG1P18858 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LIG1P18858 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 AC068870.1-201ENST00000563737 2455 ntBASIC6.54□□□□□ -1.36
LIG1P18858 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 CBX3P1-201ENST00000325243 554 ntBASIC6.54□□□□□ -1.36
LIG1P18858 RNU6-116P-201ENST00000384042 109 ntBASIC6.54□□□□□ -1.36
LIG1P18858 MIR217-201ENST00000384817 110 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AC007066.1-201ENST00000392902 381 ntBASIC6.54□□□□□ -1.36
LIG1P18858 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.54□□□□□ -1.36
LIG1P18858 ARL4AP5-201ENST00000404372 599 ntBASIC6.54□□□□□ -1.36
LIG1P18858 RNU2-42P-201ENST00000410697 113 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AC009237.5-201ENST00000414271 501 ntBASIC6.54□□□□□ -1.36
LIG1P18858 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.54□□□□□ -1.36
LIG1P18858 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.54□□□□□ -1.36
LIG1P18858 BX284632.2-201ENST00000421091 399 ntBASIC6.54□□□□□ -1.36
LIG1P18858 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 AC233728.2-201ENST00000425348 757 ntBASIC6.54□□□□□ -1.36
LIG1P18858 RPS27AP6-201ENST00000427962 448 ntBASIC6.54□□□□□ -1.36
LIG1P18858 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.54□□□□□ -1.36
LIG1P18858 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.54□□□□□ -1.36
LIG1P18858 TUBB4BP6-201ENST00000437576 479 ntBASIC6.54□□□□□ -1.36
LIG1P18858 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.54□□□□□ -1.36
LIG1P18858 USP9YP8-201ENST00000441913 500 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AL512605.1-202ENST00000441919 381 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.54□□□□□ -1.36
LIG1P18858 GDI2P2-201ENST00000445131 608 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AL359955.2-201ENST00000445380 353 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 AL034418.1-201ENST00000448675 860 ntBASIC6.54□□□□□ -1.36
LIG1P18858 COX6CP18-201ENST00000448769 222 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 AL606490.1-201ENST00000452266 765 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.54□□□□□ -1.36
LIG1P18858 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 AC093166.4-201ENST00000457867 318 ntBASIC6.54□□□□□ -1.36
LIG1P18858 RNU1-88P-201ENST00000459274 128 ntBASIC6.54□□□□□ -1.36
LIG1P18858 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.54□□□□□ -1.36
LIG1P18858 SETP14-201ENST00000497538 873 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AC008628.2-201ENST00000502605 298 ntBASIC6.54□□□□□ -1.36
LIG1P18858 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
LIG1P18858 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.54□□□□□ -1.36
LIG1P18858 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.54□□□□□ -1.36
LIG1P18858 IGHV3-63-201ENST00000518422 341 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.54□□□□□ -1.36
LIG1P18858 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.54□□□□□ -1.36
LIG1P18858 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.54□□□□□ -1.36
LIG1P18858 AC008521.2-201ENST00000591021 259 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AC023813.4-201ENST00000607580 580 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AL354760.1-201ENST00000608357 643 ntBASIC6.54□□□□□ -1.36
LIG1P18858 AP000894.4-201ENST00000610185 483 ntBASIC6.54□□□□□ -1.36
LIG1P18858 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.54□□□□□ -1.36
LIG1P18858 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
LIG1P18858 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.54□□□□□ -1.36
LIG1P18858 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.54□□□□□ -1.36
LIG1P18858 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIG1P18858 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms