Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL3L1P16619 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.1□□□□□ -1.91
CCL3L1P16619 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.1□□□□□ -1.91
CCL3L1P16619 AL358913.1-201ENST00000554342 121 ntBASIC3.1□□□□□ -1.91
CCL3L1P16619 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL3L1P16619 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.1□□□□□ -1.91
CCL3L1P16619 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL3L1P16619 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL3L1P16619 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.1□□□□□ -1.91
CCL3L1P16619 EIF1P6-201ENST00000600054 334 ntBASIC3.1□□□□□ -1.91
CCL3L1P16619 AL390816.3-201ENST00000604527 1066 ntBASIC3.1□□□□□ -1.91
CCL3L1P16619 AC074276.2-201ENST00000619891 348 ntBASIC3.1□□□□□ -1.91
CCL3L1P16619 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCL3L1P16619 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCL3L1P16619 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.1□□□□□ -1.91
CCL3L1P16619 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CCL3L1P16619 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCL3L1P16619 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCL3L1P16619 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCL3L1P16619 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCL3L1P16619 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.09□□□□□ -1.91
CCL3L1P16619 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.09□□□□□ -1.91
CCL3L1P16619 RNU1-64P-201ENST00000365443 163 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCL3L1P16619 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCL3L1P16619 AC025750.1-201ENST00000399891 379 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.09□□□□□ -1.91
CCL3L1P16619 SNORA57.3-201ENST00000411095 141 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 CYCSP19-201ENST00000411715 316 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.09□□□□□ -1.91
CCL3L1P16619 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.09□□□□□ -1.91
CCL3L1P16619 OR5AW1P-201ENST00000426334 1006 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 HMGB3P5-201ENST00000428894 612 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 ATP5HP2-201ENST00000433885 485 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.09□□□□□ -1.91
CCL3L1P16619 AC092809.1-201ENST00000441469 474 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.09□□□□□ -1.91
CCL3L1P16619 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.09□□□□□ -1.91
CCL3L1P16619 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.09□□□□□ -1.91
CCL3L1P16619 AC020898.1-201ENST00000474167 787 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 UBA52P3-201ENST00000491303 382 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.09□□□□□ -1.91
CCL3L1P16619 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.09□□□□□ -1.91
CCL3L1P16619 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.09□□□□□ -1.91
CCL3L1P16619 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCL3L1P16619 AP005901.4-201ENST00000577336 569 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 AC020978.9-201ENST00000624380 1141 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.09□□□□□ -1.91
CCL3L1P16619 OR5AC4P-202ENST00000642086 985 ntBASIC3.09□□□□□ -1.91
CCL3L1P16619 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.09□□□□□ -1.91
CCL3L1P16619 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCL3L1P16619 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.09□□□□□ -1.92
CCL3L1P16619 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CCL3L1P16619 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCL3L1P16619 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCL3L1P16619 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCL3L1P16619 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCL3L1P16619 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCL3L1P16619 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.08□□□□□ -1.92
CCL3L1P16619 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCL3L1P16619 MFSD8-236ENST00000641509 4050 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCL3L1P16619 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCL3L1P16619 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCL3L1P16619 TRAV35-201ENST00000390462 330 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AL590704.1-201ENST00000402856 794 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 SNORA79B-201ENST00000410557 148 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.08□□□□□ -1.92
CCL3L1P16619 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AL390879.2-203ENST00000426943 1121 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 USP12PY-201ENST00000427677 1064 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 HIGD1AP12-201ENST00000427832 281 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AL445584.1-201ENST00000431451 330 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AL450263.2-201ENST00000439400 589 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AC104306.1-201ENST00000449702 371 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.08□□□□□ -1.92
CCL3L1P16619 UBDP1-202ENST00000457888 382 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AP000942.1-201ENST00000463969 747 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 RPS20P21-201ENST00000466859 343 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AC007688.1-201ENST00000475592 759 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 SYT14P1-201ENST00000481459 721 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.08□□□□□ -1.92
CCL3L1P16619 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.08□□□□□ -1.92
CCL3L1P16619 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AC008802.1-201ENST00000519121 791 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCL3L1P16619 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AC008011.1-201ENST00000545989 227 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.08□□□□□ -1.92
CCL3L1P16619 BNIP3P5-201ENST00000562290 498 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.08□□□□□ -1.92
CCL3L1P16619 AL451086.1-201ENST00000605596 223 ntBASIC3.08□□□□□ -1.92
CCL3L1P16619 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.08□□□□□ -1.92
CCL3L1P16619 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms