Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.31□□□□□ -1.08
CD44P16070 RPS20P23-201ENST00000461683 354 ntBASIC8.31□□□□□ -1.08
CD44P16070 RN7SL180P-201ENST00000466769 294 ntBASIC8.31□□□□□ -1.08
CD44P16070 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 AC022133.1-201ENST00000490961 571 ntBASIC8.31□□□□□ -1.08
CD44P16070 AL117692.1-201ENST00000494283 713 ntBASIC8.31□□□□□ -1.08
CD44P16070 RNU6-638P-201ENST00000516582 104 ntBASIC8.31□□□□□ -1.08
CD44P16070 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.31□□□□□ -1.08
CD44P16070 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC8.31□□□□□ -1.08
CD44P16070 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC8.31□□□□□ -1.08
CD44P16070 TRAV28-201ENST00000557548 323 ntBASIC8.31□□□□□ -1.08
CD44P16070 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC8.31□□□□□ -1.08
CD44P16070 RN7SL376P-201ENST00000578594 264 ntBASIC8.31□□□□□ -1.08
CD44P16070 MIR4308-201ENST00000580634 81 ntBASIC8.31□□□□□ -1.08
CD44P16070 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.31□□□□□ -1.08
CD44P16070 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 AL356052.1-201ENST00000605764 376 ntBASIC8.31□□□□□ -1.08
CD44P16070 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.31□□□□□ -1.08
CD44P16070 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC8.31□□□□□ -1.08
CD44P16070 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC8.31□□□□□ -1.08
CD44P16070 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.31□□□□□ -1.08
CD44P16070 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 TRIM51GP-201ENST00000534741 1350 ntBASIC8.31□□□□□ -1.08
CD44P16070 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.31□□□□□ -1.08
CD44P16070 IRF5P1-201ENST00000504852 2164 ntBASIC8.31□□□□□ -1.08
CD44P16070 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.31□□□□□ -1.08
CD44P16070 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CD44P16070 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.3□□□□□ -1.08
CD44P16070 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CD44P16070 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CD44P16070 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CD44P16070 MRPL32P1-201ENST00000406301 247 ntBASIC8.3□□□□□ -1.08
CD44P16070 Y_RNA.590-201ENST00000410140 107 ntBASIC8.3□□□□□ -1.08
CD44P16070 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC8.3□□□□□ -1.08
CD44P16070 AC002367.1-201ENST00000416765 405 ntBASIC8.3□□□□□ -1.08
CD44P16070 CALM2P2-201ENST00000428512 440 ntBASIC8.3□□□□□ -1.08
CD44P16070 AF274573.1-201ENST00000430535 494 ntBASIC8.3□□□□□ -1.08
CD44P16070 RPL37P1-201ENST00000432310 284 ntBASIC8.3□□□□□ -1.08
CD44P16070 RPL23AP74-201ENST00000437246 471 ntBASIC8.3□□□□□ -1.08
CD44P16070 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.3□□□□□ -1.08
CD44P16070 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.3□□□□□ -1.08
CD44P16070 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 Y_RNA.638-201ENST00000459374 113 ntBASIC8.3□□□□□ -1.08
CD44P16070 AC009153.1-201ENST00000485799 496 ntBASIC8.3□□□□□ -1.08
CD44P16070 RN7SL635P-201ENST00000492123 296 ntBASIC8.3□□□□□ -1.08
CD44P16070 RN7SL869P-201ENST00000497032 300 ntBASIC8.3□□□□□ -1.08
CD44P16070 AC114300.1-201ENST00000502347 280 ntBASIC8.3□□□□□ -1.08
CD44P16070 RNU2-69P-201ENST00000516061 100 ntBASIC8.3□□□□□ -1.08
CD44P16070 RNU6-168P-201ENST00000516189 101 ntBASIC8.3□□□□□ -1.08
CD44P16070 Y_RNA.679-201ENST00000516416 91 ntBASIC8.3□□□□□ -1.08
CD44P16070 AP006587.2-201ENST00000530696 493 ntBASIC8.3□□□□□ -1.08
CD44P16070 SYF2P1-201ENST00000550658 413 ntBASIC8.3□□□□□ -1.08
CD44P16070 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC8.3□□□□□ -1.08
CD44P16070 SRMP2-201ENST00000553832 916 ntBASIC8.3□□□□□ -1.08
CD44P16070 AL121576.1-201ENST00000556055 276 ntBASIC8.3□□□□□ -1.08
CD44P16070 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.3□□□□□ -1.08
CD44P16070 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC8.3□□□□□ -1.08
CD44P16070 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.3□□□□□ -1.08
CD44P16070 FAM106CP-201ENST00000582212 507 ntBASIC8.3□□□□□ -1.08
CD44P16070 MIR4273-201ENST00000582824 84 ntBASIC8.3□□□□□ -1.08
CD44P16070 AC090699.1-201ENST00000586264 321 ntBASIC8.3□□□□□ -1.08
CD44P16070 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC8.3□□□□□ -1.08
CD44P16070 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.3□□□□□ -1.08
CD44P16070 AL391903.2-201ENST00000614532 247 ntBASIC8.3□□□□□ -1.08
CD44P16070 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.3□□□□□ -1.08
CD44P16070 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.3□□□□□ -1.08
CD44P16070 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CD44P16070 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CD44P16070 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.3□□□□□ -1.08
CD44P16070 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.3□□□□□ -1.08
CD44P16070 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC8.3□□□□□ -1.08
CD44P16070 AL591543.1-202ENST00000642095 4149 ntBASIC8.3□□□□□ -1.08
CD44P16070 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 MARK2P10-201ENST00000454959 1437 ntBASIC8.29□□□□□ -1.08
CD44P16070 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 AC233981.2-201ENST00000611524 1614 ntBASIC8.29□□□□□ -1.08
CD44P16070 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CD44P16070 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.29□□□□□ -1.08
CD44P16070 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CD44P16070 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CD44P16070 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms