Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RN7SL810P-201ENST00000493031 276 ntBASIC5.85□□□□□ -1.47
SNRPA1P09661 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.85□□□□□ -1.47
SNRPA1P09661 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.85□□□□□ -1.47
SNRPA1P09661 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNRPA1P09661 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.85□□□□□ -1.47
SNRPA1P09661 AP001804.2-201ENST00000533932 910 ntBASIC5.85□□□□□ -1.47
SNRPA1P09661 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.85□□□□□ -1.47
SNRPA1P09661 AC109446.2-201ENST00000567872 497 ntBASIC5.85□□□□□ -1.47
SNRPA1P09661 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.85□□□□□ -1.47
SNRPA1P09661 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.85□□□□□ -1.47
SNRPA1P09661 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNRPA1P09661 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.85□□□□□ -1.47
SNRPA1P09661 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.85□□□□□ -1.47
SNRPA1P09661 AC096586.1-201ENST00000610267 561 ntBASIC5.85□□□□□ -1.47
SNRPA1P09661 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 AC009951.1-201ENST00000623674 2614 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 AC093297.3-201ENST00000607056 2517 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SNRPA1P09661 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.84□□□□□ -1.47
SNRPA1P09661 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SNRPA1P09661 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 OR6C69P-201ENST00000394268 893 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 BTF3P8-201ENST00000414577 526 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.84□□□□□ -1.47
SNRPA1P09661 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.84□□□□□ -1.47
SNRPA1P09661 AC244505.3-201ENST00000454598 187 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.84□□□□□ -1.47
SNRPA1P09661 RPS20P4-201ENST00000461659 355 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.84□□□□□ -1.47
SNRPA1P09661 OR11I1P-201ENST00000486033 954 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 AC025459.1-201ENST00000504072 156 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 RN7SKP21-201ENST00000516503 220 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.84□□□□□ -1.47
SNRPA1P09661 DUX4L52-201ENST00000549363 777 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.84□□□□□ -1.47
SNRPA1P09661 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.84□□□□□ -1.47
SNRPA1P09661 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.84□□□□□ -1.47
SNRPA1P09661 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.84□□□□□ -1.47
SNRPA1P09661 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.84□□□□□ -1.47
SNRPA1P09661 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.84□□□□□ -1.47
SNRPA1P09661 AC002069.2-201ENST00000603580 883 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.84□□□□□ -1.47
SNRPA1P09661 TUSC7.1-201ENST00000610969 165 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 AC114781.5-201ENST00000615297 108 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 AC131159.1-201ENST00000621854 213 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 LINC01808-202ENST00000641680 1116 ntBASIC5.84□□□□□ -1.47
SNRPA1P09661 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.84□□□□□ -1.47
SNRPA1P09661 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNRPA1P09661 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SNRPA1P09661 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.48
SNRPA1P09661 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SNRPA1P09661 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL133268.1-201ENST00000405676 1401 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 AC104454.1-201ENST00000421341 1401 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.83□□□□□ -1.48
SNRPA1P09661 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AC068870.3-201ENST00000625077 2536 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL359922.3-201ENST00000624779 1670 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.83□□□□□ -1.48
SNRPA1P09661 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 RNU4-92P-201ENST00000363783 136 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.83□□□□□ -1.48
SNRPA1P09661 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.83□□□□□ -1.48
SNRPA1P09661 RPL21P108-201ENST00000413857 481 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL356320.2-201ENST00000417263 507 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL138787.1-202ENST00000437804 898 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 RPL23AP43-201ENST00000446445 471 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.83□□□□□ -1.48
SNRPA1P09661 MTND1P29-201ENST00000448112 647 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL133217.1-201ENST00000450980 425 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 AL161747.1-201ENST00000480068 358 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 AC023050.1-201ENST00000498198 304 ntBASIC5.83□□□□□ -1.48
SNRPA1P09661 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNRPA1P09661 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.83□□□□□ -1.48
SNRPA1P09661 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms