Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TRBV12-2-201ENST00000489763 344 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC110768.1-201ENST00000509222 400 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC110775.1-201ENST00000513721 462 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 OR5AP1P-201ENST00000529730 940 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AC011602.1-201ENST00000546484 331 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.04□□□□□ -1.92
CXCL1P09341 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC084783.1-201ENST00000565846 910 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC012417.1-201ENST00000582307 1039 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 MIR4512-201ENST00000583257 77 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 SNX6P1-201ENST00000601728 1224 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.04□□□□□ -1.92
CXCL1P09341 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.04□□□□□ -1.92
CXCL1P09341 AC103710.3-201ENST00000608157 948 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AC012409.3-201ENST00000611343 981 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.04□□□□□ -1.92
CXCL1P09341 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CXCL1P09341 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 EIF2AP4-201ENST00000424793 1781 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.04□□□□□ -1.92
CXCL1P09341 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL1P09341 AC073073.2-201ENST00000609827 2578 ntBASIC3.04□□□□□ -1.92
CXCL1P09341 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CXCL1P09341 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
CXCL1P09341 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 DHX40P1-201ENST00000588725 1412 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 RNU1-14P-201ENST00000362759 152 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 RNU6-283P-201ENST00000364788 107 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 AL583835.1-201ENST00000399570 407 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL1P09341 TMSB10P2-201ENST00000416049 131 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 P2RY10P2-201ENST00000416730 913 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 AL356387.2-201ENST00000422272 243 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 MOB1AP1-201ENST00000430903 535 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 VN1R54P-201ENST00000435210 1049 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 USP9YP7-201ENST00000436723 430 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 USP9YP32-201ENST00000452432 430 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL1P09341 AC018635.1-201ENST00000468292 1030 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL1P09341 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.03□□□□□ -1.92
CXCL1P09341 RPL29P14-201ENST00000495837 428 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL1P09341 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL1P09341 AP001922.4-201ENST00000526967 290 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 AC008011.1-201ENST00000545989 227 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL1P09341 AC106785.3-201ENST00000564064 847 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 MIR4310-201ENST00000582950 57 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 AC110743.1-201ENST00000584870 478 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL1P09341 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 AC011492.1-201ENST00000600023 315 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 AC068790.7-201ENST00000602347 528 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 PSMA6P4-201ENST00000603247 718 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL1P09341 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL1P09341 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL1P09341 AP000843.1-201ENST00000624880 701 ntBASIC3.03□□□□□ -1.92
CXCL1P09341 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
CXCL1P09341 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL1P09341 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
CXCL1P09341 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CXCL1P09341 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.02□□□□□ -1.93
CXCL1P09341 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CXCL1P09341 ZNF542P-204ENST00000482727 1305 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL1P09341 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.02□□□□□ -1.93
CXCL1P09341 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL1P09341 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL1P09341 MIR331-201ENST00000362302 94 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 SNORA60-201ENST00000362396 134 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AP002088.1-201ENST00000382740 395 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL1P09341 RN7SKP235-201ENST00000410662 305 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL1P09341 AC008072.1-201ENST00000434254 824 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms