Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RPL23AP52-201ENST00000439311 478 ntBASIC4.96□□□□□ -1.62
MMP3P08254 ARAFP2-201ENST00000440565 559 ntBASIC4.96□□□□□ -1.62
MMP3P08254 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MMP3P08254 TDGF1P1-201ENST00000445734 527 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AC092155.2-201ENST00000454675 477 ntBASIC4.96□□□□□ -1.62
MMP3P08254 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.96□□□□□ -1.62
MMP3P08254 AC020890.1-201ENST00000491837 504 ntBASIC4.96□□□□□ -1.62
MMP3P08254 MTCYBP35-201ENST00000503630 1137 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.96□□□□□ -1.62
MMP3P08254 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.96□□□□□ -1.62
MMP3P08254 PARP4P3-201ENST00000510265 317 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AC112673.1-201ENST00000513168 575 ntBASIC4.96□□□□□ -1.62
MMP3P08254 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.96□□□□□ -1.62
MMP3P08254 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MMP3P08254 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.96□□□□□ -1.62
MMP3P08254 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.96□□□□□ -1.62
MMP3P08254 AC018618.2-201ENST00000604770 446 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AL591034.3-201ENST00000605511 685 ntBASIC4.96□□□□□ -1.62
MMP3P08254 PART1_2.1-201ENST00000612397 250 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AL392048.1-201ENST00000613946 534 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AC009464.1-201ENST00000615731 469 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.96□□□□□ -1.62
MMP3P08254 AC140479.6-201ENST00000633535 357 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.96□□□□□ -1.62
MMP3P08254 AC139713.2-210ENST00000641741 992 ntBASIC4.96□□□□□ -1.62
MMP3P08254 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MMP3P08254 AC008079.2-201ENST00000623543 20396 ntBASIC4.96□□□□□ -1.62
MMP3P08254 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.96□□□□□ -1.62
MMP3P08254 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MMP3P08254 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.96□□□□□ -1.62
MMP3P08254 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
MMP3P08254 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MMP3P08254 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
MMP3P08254 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MMP3P08254 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
MMP3P08254 AC139769.1-204ENST00000472297 1931 ntBASIC4.95□□□□□ -1.62
MMP3P08254 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MMP3P08254 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
MMP3P08254 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 RNU6-532P-201ENST00000384318 107 ntBASIC4.95□□□□□ -1.62
MMP3P08254 SNORA37-201ENST00000384504 129 ntBASIC4.95□□□□□ -1.62
MMP3P08254 MIR3065-201ENST00000390137 79 ntBASIC4.95□□□□□ -1.62
MMP3P08254 ATP5F1P2-201ENST00000398143 760 ntBASIC4.95□□□□□ -1.62
MMP3P08254 SNORA11F-201ENST00000408237 128 ntBASIC4.95□□□□□ -1.62
MMP3P08254 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.95□□□□□ -1.62
MMP3P08254 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MMP3P08254 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MMP3P08254 AL035246.1-201ENST00000433554 1255 ntBASIC4.95□□□□□ -1.62
MMP3P08254 OR4C10P-201ENST00000434991 931 ntBASIC4.95□□□□□ -1.62
MMP3P08254 HSFY3P-201ENST00000444242 1191 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AL358794.1-201ENST00000445689 381 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.95□□□□□ -1.62
MMP3P08254 MIR2116-201ENST00000517221 80 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MMP3P08254 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.95□□□□□ -1.62
MMP3P08254 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 VN1R87P-201ENST00000596706 487 ntBASIC4.95□□□□□ -1.62
MMP3P08254 BNIP3P33-201ENST00000598912 569 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AC079587.1-201ENST00000603846 277 ntBASIC4.95□□□□□ -1.62
MMP3P08254 Z99289.3-201ENST00000605586 594 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.95□□□□□ -1.62
MMP3P08254 AL135786.2-201ENST00000608422 615 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AC006840.1-201ENST00000623069 542 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AC104985.3-201ENST00000623479 597 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AP000676.4-201ENST00000624659 623 ntBASIC4.95□□□□□ -1.62
MMP3P08254 MIR492-201ENST00000638676 116 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.95□□□□□ -1.62
MMP3P08254 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MMP3P08254 AC022893.2-201ENST00000564832 3296 ntBASIC4.95□□□□□ -1.62
MMP3P08254 MTCO1P18-201ENST00000455518 1419 ntBASIC4.95□□□□□ -1.62
MMP3P08254 AC027228.2-201ENST00000567141 2154 ntBASIC4.95□□□□□ -1.62
MMP3P08254 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
MMP3P08254 SPATA2P1-201ENST00000431223 2055 ntBASIC4.95□□□□□ -1.62
MMP3P08254 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
MMP3P08254 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.95□□□□□ -1.62
MMP3P08254 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
MMP3P08254 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 AL158163.1-201ENST00000603915 1649 ntBASIC4.94□□□□□ -1.62
MMP3P08254 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MMP3P08254 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
MMP3P08254 AC006971.1-201ENST00000407916 4486 ntBASIC4.94□□□□□ -1.62
MMP3P08254 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MMP3P08254 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.94□□□□□ -1.62
MMP3P08254 OR56B2P-201ENST00000317102 954 ntBASIC4.94□□□□□ -1.62
MMP3P08254 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms