Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RN7SKP44-201ENST00000363602 316 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 SNORA62.2-201ENST00000364672 152 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL450992.3-201ENST00000413192 568 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 MTCO3P4-201ENST00000419236 787 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC073464.3-201ENST00000422564 712 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 RPL12P34-201ENST00000424532 479 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 FAR1P1-201ENST00000427163 934 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC104837.2-201ENST00000427236 424 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 MTCO1P54-201ENST00000430139 712 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 RPL12P46-201ENST00000436610 195 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL772161.1-201ENST00000439130 476 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 CBX1P4-201ENST00000439415 457 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 MTND2P6-201ENST00000455337 1030 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 RPS3AP41-201ENST00000462701 778 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 RPS27AP17-201ENST00000463344 455 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 CABYRP1-201ENST00000465493 1045 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 RPL7P16-201ENST00000479738 738 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC093663.2-201ENST00000484625 313 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC104164.2-201ENST00000496953 495 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 HPRT1P2-201ENST00000505250 544 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 SNRPGP1-201ENST00000553864 222 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 GNRHR2P1-201ENST00000555315 631 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL109741.3-201ENST00000561748 592 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 CBX3P2-202ENST00000583365 535 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 OR4H6P-202ENST00000603819 340 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC104662.1-201ENST00000604448 511 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC005084.1-201ENST00000605160 304 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL450270.1-201ENST00000606160 391 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC004775.1-201ENST00000607389 753 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC017076.1-201ENST00000607613 578 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL645927.2-201ENST00000618350 349 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC087385.3-201ENST00000620477 187 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL445528.2-201ENST00000620582 470 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AL163152.1-201ENST00000642001 374 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 AC092162.3-201ENST00000624511 1624 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 CYP1D1P-201ENST00000416662 1433 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 ZNF137P-201ENST00000456718 1920 ntBASIC3.17□□□□□ -1.9
HLA-DQA1P01909 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DQA1P01909 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC103591.2-201ENST00000265259 766 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 RNU6-317P-201ENST00000384031 107 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 RNU6-146P-201ENST00000384602 108 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 LINC01881-201ENST00000416103 412 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 MORF4L1P7-201ENST00000426038 703 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 VDAC1P6-201ENST00000430062 855 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 RPL12P28-201ENST00000430852 489 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms