Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC013429.2-201ENST00000418798 781 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 RGS17P1-201ENST00000423358 553 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFBP01127 AL356276.2-201ENST00000435919 558 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 SNORA59A-201ENST00000459326 152 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFBP01127 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFBP01127 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFBP01127 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
PDGFBP01127 RN7SKP157-201ENST00000516174 282 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.49□□□□□ -1.69
PDGFBP01127 AC022790.1-201ENST00000522872 204 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.49□□□□□ -1.69
PDGFBP01127 AP000619.3-201ENST00000535634 1127 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.49□□□□□ -1.69
PDGFBP01127 MIR3908-201ENST00000579798 126 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 PRPF19P1-201ENST00000584766 898 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFBP01127 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 AL355802.4-201ENST00000607635 548 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 AC012314.7-201ENST00000619693 93 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PDGFBP01127 AC005858.4-201ENST00000623191 700 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFBP01127 AC011755.1-201ENST00000623763 2049 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFBP01127 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
PDGFBP01127 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFBP01127 USP9YP4-201ENST00000424401 1745 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFBP01127 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFBP01127 CPHL1P-201ENST00000461341 3407 ntBASIC4.49□□□□□ -1.69
PDGFBP01127 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFBP01127 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFBP01127 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFBP01127 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 ZNF90P1-201ENST00000480493 1951 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFBP01127 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDGFBP01127 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFBP01127 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFBP01127 UBBP2-201ENST00000376781 231 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 MIR491-201ENST00000384877 84 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFBP01127 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFBP01127 AC068533.1-201ENST00000418542 415 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 VN1R37P-201ENST00000419096 748 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 COX6B1P7-201ENST00000430845 235 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 AC092685.1-201ENST00000447960 1243 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 RPL7P31-201ENST00000450192 724 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 AL935212.3-201ENST00000450729 284 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFBP01127 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFBP01127 CYCSP53-201ENST00000455540 265 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFBP01127 AL049874.2-201ENST00000492636 288 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 AC023050.1-201ENST00000498198 304 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.48□□□□□ -1.69
PDGFBP01127 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFBP01127 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.48□□□□□ -1.69
PDGFBP01127 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFBP01127 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFBP01127 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFBP01127 AC005868.1-201ENST00000536421 331 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 AC106785.3-201ENST00000564064 847 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 OR4H6P-202ENST00000603819 340 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 AL121772.2-201ENST00000614331 297 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 AC018816.2-201ENST00000621460 353 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 AP006248.2-201ENST00000623309 592 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFBP01127 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFBP01127 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 AC007529.1-201ENST00000418574 2178 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 AC000123.3-201ENST00000624029 4975 ntBASIC4.48□□□□□ -1.69
PDGFBP01127 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PDGFBP01127 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFBP01127 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFBP01127 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFBP01127 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFBP01127 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PDGFBP01127 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFBP01127 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms