Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SEMA3DO95025 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SEMA3DO95025 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.96□□□□□ -1.78
SEMA3DO95025 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SEMA3DO95025 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.95□□□□□ -1.78
SEMA3DO95025 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SEMA3DO95025 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SEMA3DO95025 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SEMA3DO95025 MIR383-201ENST00000362257 73 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SEMA3DO95025 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SEMA3DO95025 RPL23AP26-201ENST00000412728 464 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 PGBD4P8-201ENST00000412993 562 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.95□□□□□ -1.78
SEMA3DO95025 RPL18P10-201ENST00000425606 538 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 RPL23AP4-201ENST00000427757 463 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.95□□□□□ -1.78
SEMA3DO95025 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.95□□□□□ -1.78
SEMA3DO95025 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 UQCRHP4-201ENST00000471686 272 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.95□□□□□ -1.78
SEMA3DO95025 RN7SL459P-201ENST00000481078 302 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC091167.1-201ENST00000492017 396 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC108475.1-201ENST00000507880 950 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.95□□□□□ -1.78
SEMA3DO95025 OR4C2P-201ENST00000530855 1064 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 NPM1P35-201ENST00000533043 868 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC091515.1-201ENST00000548110 679 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SEMA3DO95025 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC141257.3-201ENST00000572906 215 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 MIR4284-201ENST00000578924 81 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 PSMA6P4-201ENST00000603247 718 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 GMCL1P2-201ENST00000605230 823 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 AL592494.3-201ENST00000609485 464 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 C2orf27A-204ENST00000623058 969 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 AP000843.1-201ENST00000624880 701 ntBASIC3.95□□□□□ -1.78
SEMA3DO95025 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.95□□□□□ -1.78
SEMA3DO95025 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SEMA3DO95025 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SEMA3DO95025 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SEMA3DO95025 AC116667.1-201ENST00000604855 2072 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SEMA3DO95025 EXOC5P1-201ENST00000510543 1969 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SEMA3DO95025 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.94□□□□□ -1.78
SEMA3DO95025 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.94□□□□□ -1.78
SEMA3DO95025 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.94□□□□□ -1.78
SEMA3DO95025 RNU1-32P-201ENST00000363937 159 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.94□□□□□ -1.78
SEMA3DO95025 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.94□□□□□ -1.78
SEMA3DO95025 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.94□□□□□ -1.78
SEMA3DO95025 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.94□□□□□ -1.78
SEMA3DO95025 MTND2P25-201ENST00000449028 610 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.94□□□□□ -1.78
SEMA3DO95025 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.94□□□□□ -1.78
SEMA3DO95025 RPL7P1-201ENST00000468161 747 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 RPL7P9-201ENST00000468715 747 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SEMA3DO95025 AC087385.1-201ENST00000475062 312 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 RN7SL271P-201ENST00000487601 295 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 AF213884.1-201ENST00000488102 463 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 RPL29P14-201ENST00000495837 428 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 AC147055.1-201ENST00000509261 750 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 AC034205.1-201ENST00000520621 638 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 AC008676.3-201ENST00000521237 435 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.94□□□□□ -1.78
SEMA3DO95025 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.94□□□□□ -1.78
SEMA3DO95025 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.94□□□□□ -1.78
SEMA3DO95025 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.94□□□□□ -1.78
SEMA3DO95025 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.94□□□□□ -1.78
SEMA3DO95025 AC007599.1-201ENST00000568688 1174 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 AC104662.1-201ENST00000604448 511 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 AC114781.5-201ENST00000615297 108 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 MIR7151-201ENST00000617477 60 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.94□□□□□ -1.78
SEMA3DO95025 MIR8059-201ENST00000620427 81 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.94□□□□□ -1.78
SEMA3DO95025 AC011944.2-201ENST00000624440 683 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 MIR7641-1-201ENST00000627518 61 ntBASIC3.94□□□□□ -1.78
SEMA3DO95025 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.94□□□□□ -1.78
SEMA3DO95025 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.94□□□□□ -1.78
SEMA3DO95025 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SEMA3DO95025 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.94□□□□□ -1.78
SEMA3DO95025 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SEMA3DO95025 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SEMA3DO95025 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SEMA3DO95025 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SEMA3DO95025 AC066616.2-201ENST00000559334 1481 ntBASIC3.93□□□□□ -1.78
SEMA3DO95025 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.93□□□□□ -1.78
SEMA3DO95025 LARP1BP1-201ENST00000506036 1359 ntBASIC3.93□□□□□ -1.78
SEMA3DO95025 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 478.4 ms