Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS4BO75351 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS4BO75351 RFPL1S-203ENST00000539579 330 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS4BO75351 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4BO75351 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS4BO75351 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS4BO75351 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 MIR3915-201ENST00000578518 97 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 OR4K7P-201ENST00000580232 945 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 AP001981.2-201ENST00000603241 418 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 AP000811.1-201ENST00000603803 651 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 AC009597.2-201ENST00000604659 592 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 AC126915.2-201ENST00000610957 190 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 AP002505.2-201ENST00000623585 696 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 AP000648.2-201ENST00000624182 404 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS4BO75351 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS4BO75351 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4BO75351 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4BO75351 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4BO75351 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 AC109315.1-201ENST00000584143 1347 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4BO75351 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4BO75351 AL034549.2-201ENST00000618285 3373 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4BO75351 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS4BO75351 MTND4P5-201ENST00000435821 1374 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 MTND4P34-201ENST00000572715 1371 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 DDX43P2-201ENST00000604753 1354 ntBASIC5.16□□□□□ -1.58
VPS4BO75351 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VPS4BO75351 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS4BO75351 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS4BO75351 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS4BO75351 ASNSP1-204ENST00000641977 1664 ntBASIC5.15□□□□□ -1.58
VPS4BO75351 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS4BO75351 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
VPS4BO75351 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.15□□□□□ -1.58
VPS4BO75351 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
VPS4BO75351 AC006210.2-201ENST00000367074 1545 ntBASIC5.15□□□□□ -1.58
VPS4BO75351 RNU6-839P-201ENST00000363347 108 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
VPS4BO75351 RNU2-6P-201ENST00000411404 190 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4BO75351 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4BO75351 AC005033.1-201ENST00000428904 813 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 AL589823.1-201ENST00000429577 183 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 OR52B5P-201ENST00000435337 951 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 TXNP5-201ENST00000441043 315 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS4BO75351 Z80107.2-201ENST00000445127 392 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 COX6CP18-201ENST00000448769 222 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 BX842559.2-201ENST00000451418 605 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4BO75351 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS4BO75351 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS4BO75351 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4BO75351 RN7SL447P-201ENST00000494711 245 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4BO75351 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4BO75351 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4BO75351 AC147055.4-201ENST00000504399 745 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4BO75351 RNU6-1225P-201ENST00000516336 65 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS4BO75351 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS4BO75351 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS4BO75351 AP001922.4-201ENST00000526967 290 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4BO75351 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4BO75351 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4BO75351 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS4BO75351 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS4BO75351 AC122134.1-201ENST00000565664 1104 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS4BO75351 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 AL118522.2-201ENST00000616045 615 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 AC018926.3-201ENST00000618841 406 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 AC091931.1-201ENST00000623488 728 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS4BO75351 OR52B5P-202ENST00000641118 1110 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.59
VPS4BO75351 DCAF13P3-201ENST00000561147 1334 ntBASIC5.15□□□□□ -1.59
VPS4BO75351 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
VPS4BO75351 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4BO75351 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4BO75351 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4BO75351 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS4BO75351 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 AL390237.1-201ENST00000404226 1415 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms