Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RN7SKP95-201ENST00000362860 303 ntBASIC4.28□□□□□ -1.72
SNX3O60493 SNORA17A-201ENST00000391185 133 ntBASIC4.28□□□□□ -1.72
SNX3O60493 SDHCP2-201ENST00000398565 501 ntBASIC4.28□□□□□ -1.72
SNX3O60493 RNU2-6P-201ENST00000411404 190 ntBASIC4.28□□□□□ -1.72
SNX3O60493 RPS20P14-201ENST00000412545 360 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX3O60493 AC115285.1-201ENST00000424879 736 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AC009965.2-201ENST00000425328 970 ntBASIC4.28□□□□□ -1.72
SNX3O60493 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SNX3O60493 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX3O60493 ARF4P4-201ENST00000439608 520 ntBASIC4.28□□□□□ -1.72
SNX3O60493 RPS7P5-201ENST00000441482 581 ntBASIC4.28□□□□□ -1.72
SNX3O60493 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX3O60493 TRY2P-201ENST00000448860 689 ntBASIC4.28□□□□□ -1.72
SNX3O60493 OR51B8P-201ENST00000449892 769 ntBASIC4.28□□□□□ -1.72
SNX3O60493 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SNX3O60493 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.28□□□□□ -1.72
SNX3O60493 RPS26P39-201ENST00000469206 341 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AC146944.2-203ENST00000502493 354 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.28□□□□□ -1.72
SNX3O60493 SUMO2P5-201ENST00000506790 245 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX3O60493 AC139495.1-202ENST00000513164 354 ntBASIC4.28□□□□□ -1.72
SNX3O60493 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX3O60493 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX3O60493 AF186190.1-201ENST00000517470 480 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.28□□□□□ -1.72
SNX3O60493 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX3O60493 AL352979.3-201ENST00000553515 247 ntBASIC4.28□□□□□ -1.72
SNX3O60493 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SNX3O60493 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX3O60493 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX3O60493 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.28□□□□□ -1.72
SNX3O60493 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.28□□□□□ -1.72
SNX3O60493 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.28□□□□□ -1.72
SNX3O60493 VN1R84P-201ENST00000593697 235 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AC104763.3-201ENST00000613765 618 ntBASIC4.28□□□□□ -1.72
SNX3O60493 RN7SL722P-201ENST00000617780 284 ntBASIC4.28□□□□□ -1.72
SNX3O60493 RN7SL565P-201ENST00000618246 284 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AC022079.2-201ENST00000619739 566 ntBASIC4.28□□□□□ -1.72
SNX3O60493 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.28□□□□□ -1.72
SNX3O60493 AC016717.3-201ENST00000624730 554 ntBASIC4.28□□□□□ -1.72
SNX3O60493 CR392039.4-201ENST00000624968 501 ntBASIC4.28□□□□□ -1.72
SNX3O60493 SNORA17.5-201ENST00000630429 132 ntBASIC4.28□□□□□ -1.72
SNX3O60493 LINC01739-205ENST00000641890 573 ntBASIC4.28□□□□□ -1.72
SNX3O60493 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SNX3O60493 AC108467.2-201ENST00000617640 1597 ntBASIC4.27□□□□□ -1.73
SNX3O60493 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX3O60493 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SNX3O60493 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX3O60493 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX3O60493 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX3O60493 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SNX3O60493 RNU6-1339P-201ENST00000363574 91 ntBASIC4.27□□□□□ -1.73
SNX3O60493 RN7SKP15-201ENST00000364742 309 ntBASIC4.27□□□□□ -1.73
SNX3O60493 SNORA37-201ENST00000384504 129 ntBASIC4.27□□□□□ -1.73
SNX3O60493 RNU6-178P-201ENST00000384631 104 ntBASIC4.27□□□□□ -1.73
SNX3O60493 GLULP6-201ENST00000399502 913 ntBASIC4.27□□□□□ -1.73
SNX3O60493 DNAJC19P6-201ENST00000401853 280 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX3O60493 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX3O60493 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX3O60493 AL161631.1-201ENST00000417933 486 ntBASIC4.27□□□□□ -1.73
SNX3O60493 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 TCEA1P2-201ENST00000420496 906 ntBASIC4.27□□□□□ -1.73
SNX3O60493 PTP4A1P7-201ENST00000423476 514 ntBASIC4.27□□□□□ -1.73
SNX3O60493 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX3O60493 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX3O60493 LYPLA1P1-201ENST00000434514 622 ntBASIC4.27□□□□□ -1.73
SNX3O60493 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX3O60493 AC112498.1-201ENST00000444401 332 ntBASIC4.27□□□□□ -1.73
SNX3O60493 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX3O60493 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX3O60493 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 AC023141.9-201ENST00000458734 412 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AC006511.1-201ENST00000470614 315 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AC008427.1-201ENST00000503102 655 ntBASIC4.27□□□□□ -1.73
SNX3O60493 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX3O60493 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 AL110118.1-201ENST00000553543 400 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX3O60493 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.27□□□□□ -1.73
SNX3O60493 YWHAZP1-201ENST00000556286 722 ntBASIC4.27□□□□□ -1.73
SNX3O60493 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AC023824.3-201ENST00000569003 562 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AC141257.3-201ENST00000572906 215 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.27□□□□□ -1.73
SNX3O60493 AC110743.1-201ENST00000584870 478 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX3O60493 AP002802.2-201ENST00000605877 235 ntBASIC4.27□□□□□ -1.73
SNX3O60493 AL512329.2-201ENST00000607350 548 ntBASIC4.27□□□□□ -1.73
SNX3O60493 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX3O60493 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX3O60493 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX3O60493 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms