Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.68□□□□□ -1.66
LDB2O43679 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.68□□□□□ -1.66
LDB2O43679 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.68□□□□□ -1.66
LDB2O43679 AC090695.1-201ENST00000561269 1222 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.68□□□□□ -1.66
LDB2O43679 AC091057.2-201ENST00000602594 792 ntBASIC4.68□□□□□ -1.66
LDB2O43679 COX6CP4-201ENST00000605798 228 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AC016877.3-201ENST00000606778 504 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AL445423.1-201ENST00000609941 536 ntBASIC4.68□□□□□ -1.66
LDB2O43679 STMN1P1-201ENST00000617809 440 ntBASIC4.68□□□□□ -1.66
LDB2O43679 MIR6853-201ENST00000619642 74 ntBASIC4.68□□□□□ -1.66
LDB2O43679 LINC02211-204ENST00000642024 1070 ntBASIC4.68□□□□□ -1.66
LDB2O43679 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 GTF2H2B-203ENST00000508065 1432 ntBASIC4.68□□□□□ -1.66
LDB2O43679 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
LDB2O43679 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 AL136164.3-201ENST00000624429 3978 ntBASIC4.68□□□□□ -1.66
LDB2O43679 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 AP001642.1-201ENST00000624727 2117 ntBASIC4.67□□□□□ -1.66
LDB2O43679 CCT8P1-201ENST00000413611 1657 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.67□□□□□ -1.66
LDB2O43679 MTND4P10-201ENST00000446199 1363 ntBASIC4.67□□□□□ -1.66
LDB2O43679 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 AL672167.1-203ENST00000641299 2975 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC135352.1-201ENST00000506173 1418 ntBASIC4.67□□□□□ -1.66
LDB2O43679 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 ENSAP3-201ENST00000312710 333 ntBASIC4.67□□□□□ -1.66
LDB2O43679 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 RNU6-543P-201ENST00000362576 108 ntBASIC4.67□□□□□ -1.66
LDB2O43679 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.67□□□□□ -1.66
LDB2O43679 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.67□□□□□ -1.66
LDB2O43679 AC104297.1-201ENST00000393779 870 ntBASIC4.67□□□□□ -1.66
LDB2O43679 RNA5SP296-201ENST00000410523 111 ntBASIC4.67□□□□□ -1.66
LDB2O43679 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.67□□□□□ -1.66
LDB2O43679 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.67□□□□□ -1.66
LDB2O43679 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
LDB2O43679 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 AC016831.4-201ENST00000438302 307 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC002542.1-201ENST00000440683 193 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.67□□□□□ -1.66
LDB2O43679 AC068135.1-201ENST00000446164 246 ntBASIC4.67□□□□□ -1.66
LDB2O43679 PTENP1-201ENST00000447117 1215 ntBASIC4.67□□□□□ -1.66
LDB2O43679 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 MRPL35P4-201ENST00000453682 566 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.67□□□□□ -1.66
LDB2O43679 MTND2P14-201ENST00000482139 351 ntBASIC4.67□□□□□ -1.66
LDB2O43679 RPL36AP41-201ENST00000493820 306 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC082651.2-201ENST00000496833 166 ntBASIC4.67□□□□□ -1.66
LDB2O43679 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 AC091860.1-201ENST00000505723 432 ntBASIC4.67□□□□□ -1.66
LDB2O43679 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.67□□□□□ -1.66
LDB2O43679 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.67□□□□□ -1.66
LDB2O43679 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 SNORA3.4-201ENST00000515969 96 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.67□□□□□ -1.66
LDB2O43679 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.67□□□□□ -1.66
LDB2O43679 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.67□□□□□ -1.66
LDB2O43679 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.67□□□□□ -1.66
LDB2O43679 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.67□□□□□ -1.66
LDB2O43679 AC091042.1-201ENST00000579213 173 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.67□□□□□ -1.66
LDB2O43679 AP005262.1-201ENST00000582646 997 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.67□□□□□ -1.66
LDB2O43679 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.67□□□□□ -1.66
LDB2O43679 AC125494.3-201ENST00000602759 455 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC073091.2-201ENST00000603205 907 ntBASIC4.67□□□□□ -1.66
LDB2O43679 MTND3P19-201ENST00000603825 345 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AL139344.1-201ENST00000605228 195 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AL121890.2-201ENST00000617644 465 ntBASIC4.67□□□□□ -1.66
LDB2O43679 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.67□□□□□ -1.66
LDB2O43679 AC007342.8-201ENST00000623278 678 ntBASIC4.67□□□□□ -1.66
LDB2O43679 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LDB2O43679 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDB2O43679 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LDB2O43679 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.66□□□□□ -1.66
LDB2O43679 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.66□□□□□ -1.66
LDB2O43679 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LDB2O43679 AC010928.1-201ENST00000592477 1447 ntBASIC4.66□□□□□ -1.66
LDB2O43679 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LDB2O43679 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.66□□□□□ -1.66
LDB2O43679 MIR320B1-201ENST00000390209 79 ntBASIC4.66□□□□□ -1.66
LDB2O43679 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDB2O43679 RN7SKP267-201ENST00000410381 285 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms