Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC007394.1-201ENST00000421941 531 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.61□□□□□ -1.51
PRPF3O43395 RPL12P34-201ENST00000424532 479 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AL158073.1-201ENST00000426848 1104 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.61□□□□□ -1.51
PRPF3O43395 RPL37P1-201ENST00000432310 284 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.61□□□□□ -1.51
PRPF3O43395 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.61□□□□□ -1.51
PRPF3O43395 RPL12P46-201ENST00000436610 195 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.61□□□□□ -1.51
PRPF3O43395 ZNF652P1-201ENST00000442420 1309 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 MTND1P31-201ENST00000449206 961 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AURKAPS2-201ENST00000454983 333 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF3O43395 KLRA1P-201ENST00000503499 986 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 NDUFB5P1-201ENST00000508134 564 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 MTCYBP16-201ENST00000509187 1129 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 SNORA3.4-201ENST00000515969 96 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.61□□□□□ -1.51
PRPF3O43395 UBTFL10-201ENST00000528532 562 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC023538.1-201ENST00000534576 736 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.61□□□□□ -1.51
PRPF3O43395 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.61□□□□□ -1.51
PRPF3O43395 AC087465.1-201ENST00000560574 245 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 OR1F2P-201ENST00000570470 933 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 MIR4472-2-201ENST00000582069 67 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC053481.2-202ENST00000582394 1500 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC069366.1-201ENST00000583159 838 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC110743.1-201ENST00000584870 478 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 GAS5-AS1-201ENST00000602767 694 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AL390816.3-201ENST00000604527 1066 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC096553.1-201ENST00000605169 829 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AL121932.1-201ENST00000605542 214 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC107952.2-201ENST00000606048 486 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
PRPF3O43395 AP000484.1-201ENST00000620067 1252 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC015908.5-201ENST00000623289 343 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AC079416.3-201ENST00000624479 549 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AP003072.4-201ENST00000624580 310 ntBASIC5.61□□□□□ -1.51
PRPF3O43395 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF3O43395 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PRPF3O43395 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.61□□□□□ -1.51
PRPF3O43395 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF3O43395 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF3O43395 AC131971.1-201ENST00000332881 1482 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF3O43395 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF3O43395 DDX18P5-201ENST00000534547 1306 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF3O43395 RNU6-1066P-201ENST00000363573 105 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF3O43395 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PRPF3O43395 AL645733.1-201ENST00000402250 217 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AC114755.2-201ENST00000413520 361 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF3O43395 COX6B1P1-201ENST00000415962 213 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AC019050.1-201ENST00000418508 492 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 MRPS36P1-201ENST00000421291 307 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 RGS17P1-201ENST00000423358 553 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF3O43395 IPMKP1-201ENST00000425988 855 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AL451139.1-201ENST00000434718 346 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF3O43395 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF3O43395 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.6□□□□□ -1.51
PRPF3O43395 AC234781.3-201ENST00000452540 973 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF3O43395 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF3O43395 AC090686.1-201ENST00000481577 749 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AC126121.1-201ENST00000482313 553 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 RPL32P9-201ENST00000487963 407 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF3O43395 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF3O43395 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PRPF3O43395 AC087808.1-201ENST00000520501 361 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF3O43395 MTATP6P15-201ENST00000527233 835 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF3O43395 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.6□□□□□ -1.51
PRPF3O43395 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.6□□□□□ -1.51
PRPF3O43395 MTND3P12-201ENST00000559068 328 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AC009117.1-201ENST00000563948 554 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 BGLT3-201ENST00000564523 994 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF3O43395 MIR4716-201ENST00000579628 84 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF3O43395 AC091057.2-201ENST00000602594 792 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF3O43395 AC023158.2-201ENST00000614876 543 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 MIR6730-201ENST00000622213 67 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 CASC19-222ENST00000641321 1173 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.6□□□□□ -1.51
PRPF3O43395 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PRPF3O43395 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF3O43395 AL450326.2-201ENST00000421913 1962 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 AL731532.2-201ENST00000623542 1953 ntBASIC5.6□□□□□ -1.51
PRPF3O43395 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF3O43395 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PRPF3O43395 SAMMSON-226ENST00000642089 1582 ntBASIC5.59□□□□□ -1.51
PRPF3O43395 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms