Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC018926.3-201ENST00000618841 406 ntBASIC6.33□□□□□ -1.4
SOX1O00570 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 AL450226.2-201ENST00000622913 439 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC139792.3-201ENST00000623525 224 ntBASIC6.33□□□□□ -1.4
SOX1O00570 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX1O00570 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.33□□□□□ -1.4
SOX1O00570 AC005839.1-201ENST00000624148 3213 ntBASIC6.33□□□□□ -1.4
SOX1O00570 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX1O00570 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX1O00570 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
SOX1O00570 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 FRG1BP-201ENST00000278882 761 ntBASIC6.32□□□□□ -1.4
SOX1O00570 FRG1CP-201ENST00000358464 769 ntBASIC6.32□□□□□ -1.4
SOX1O00570 RNU6-845P-201ENST00000362578 103 ntBASIC6.32□□□□□ -1.4
SOX1O00570 U8.3-201ENST00000363321 132 ntBASIC6.32□□□□□ -1.4
SOX1O00570 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 MIR192-201ENST00000384915 110 ntBASIC6.32□□□□□ -1.4
SOX1O00570 MIR506-201ENST00000384998 124 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AL450338.1-201ENST00000407987 512 ntBASIC6.32□□□□□ -1.4
SOX1O00570 RNA5SP118-201ENST00000410385 109 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC073264.1-201ENST00000411508 416 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX1O00570 AL136133.1-201ENST00000413694 376 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.32□□□□□ -1.4
SOX1O00570 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AL133173.1-201ENST00000423458 397 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 DUTP4-201ENST00000424782 475 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC113412.1-201ENST00000425840 504 ntBASIC6.32□□□□□ -1.4
SOX1O00570 NPM1P34-201ENST00000428821 893 ntBASIC6.32□□□□□ -1.4
SOX1O00570 NANOGP6-201ENST00000429190 847 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX1O00570 TXNP5-201ENST00000441043 315 ntBASIC6.32□□□□□ -1.4
SOX1O00570 RPS7P5-201ENST00000441482 581 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC011753.3-201ENST00000443436 406 ntBASIC6.32□□□□□ -1.4
SOX1O00570 RPL23AP20-201ENST00000447965 421 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AC099563.1-201ENST00000456086 418 ntBASIC6.32□□□□□ -1.4
SOX1O00570 RPL7AP52-201ENST00000458096 790 ntBASIC6.32□□□□□ -1.4
SOX1O00570 RPS27P23-201ENST00000487608 251 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC026826.1-201ENST00000493002 361 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AC112204.1-201ENST00000502591 103 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AC093809.1-201ENST00000509155 340 ntBASIC6.32□□□□□ -1.4
SOX1O00570 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AC010486.1-201ENST00000511793 424 ntBASIC6.32□□□□□ -1.4
SOX1O00570 SNORA48.10-201ENST00000516965 160 ntBASIC6.32□□□□□ -1.4
SOX1O00570 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX1O00570 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX1O00570 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.32□□□□□ -1.4
SOX1O00570 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.32□□□□□ -1.4
SOX1O00570 AC126177.5-201ENST00000549599 178 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AC063949.1-201ENST00000552900 865 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC007424.1-203ENST00000554613 687 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 AC009120.3-201ENST00000563335 499 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX1O00570 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.32□□□□□ -1.4
SOX1O00570 AP001429.1-201ENST00000602568 530 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC006504.8-201ENST00000621046 635 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC034229.6-201ENST00000623704 224 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AC091905.1-201ENST00000624400 311 ntBASIC6.32□□□□□ -1.4
SOX1O00570 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX1O00570 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SOX1O00570 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX1O00570 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX1O00570 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 AL645937.1-201ENST00000641739 1652 ntBASIC6.32□□□□□ -1.4
SOX1O00570 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SOX1O00570 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX1O00570 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX1O00570 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX1O00570 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SOX1O00570 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX1O00570 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX1O00570 AC006378.2-201ENST00000623178 2476 ntBASIC6.32□□□□□ -1.4
SOX1O00570 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX1O00570 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 GUCY1B2-204ENST00000531898 1979 ntBASIC6.31□□□□□ -1.4
SOX1O00570 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX1O00570 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX1O00570 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 SALL4P7-201ENST00000555779 3120 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms