Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 Y_RNA.582-201ENST00000391023 95 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 SNORD115-47-201ENST00000391226 86 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 SNORA11C-201ENST00000408532 129 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 RNU6-575P-201ENST00000411326 105 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC234782.4-201ENST00000417646 1048 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 RPL21P32-201ENST00000419877 477 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC009480.2-201ENST00000422916 432 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC012498.1-201ENST00000424037 437 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 OR10T1P-201ENST00000424327 947 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 BX323845.3-201ENST00000428215 527 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 PCBP2P1-201ENST00000437262 977 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AL512286.1-201ENST00000439244 400 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC092809.1-201ENST00000441469 474 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 RAB11AP1-201ENST00000442978 646 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 RANP1-206ENST00000455094 651 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 Z83838.1-202ENST00000456225 839 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 KLF3P2-201ENST00000465138 268 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC006511.1-201ENST00000470614 315 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 RPS17P15-201ENST00000475609 349 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC009120.1-201ENST00000493458 473 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC122718.2-201ENST00000505325 591 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 Y_RNA.667-201ENST00000516212 107 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 OR5BC1P-201ENST00000529327 739 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 HMGN2P36-201ENST00000529541 409 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 NIFKP8-201ENST00000560500 874 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 Y_RNA.804-201ENST00000615262 101 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC006338.1-201ENST00000618453 749 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC009704.2-201ENST00000618739 483 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AL591926.1-201ENST00000620542 217 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC024884.1-201ENST00000620583 399 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC005618.4-201ENST00000625053 554 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AL138820.1-201ENST00000617901 5305 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 AC083899.1-201ENST00000454465 3819 ntBASIC4.53□□□□□ -1.68
CGB1A6NKQ9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CGB1A6NKQ9 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.53□□□□□ -1.69
CGB1A6NKQ9 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
CGB1A6NKQ9 AC093535.2-201ENST00000624769 2326 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC109315.1-201ENST00000584143 1347 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RNU4-76P-201ENST00000364509 141 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 1153.5 ms