Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 Z82217.1-201ENST00000625157 8149 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC073429.2-201ENST00000569694 1444 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC021146.4-201ENST00000309229 279 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC007685.1-201ENST00000329806 452 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 RNA5SP123-201ENST00000363244 119 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 MIR7-1-201ENST00000384871 110 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AL133270.1-201ENST00000402635 279 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AMZ2P2-201ENST00000406819 1057 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 MIR1179-201ENST00000408703 91 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 RPS12P23-201ENST00000419579 400 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 RNF19BPX-201ENST00000426224 625 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 BMS1P19-201ENST00000433925 393 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 MED6P1-201ENST00000439659 713 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AL500522.2-201ENST00000448562 343 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 RPL37AP8-201ENST00000494116 276 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 HMGB1P21-201ENST00000502313 581 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 OR5H4P-201ENST00000510851 923 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC010285.3-201ENST00000511668 676 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC074029.2-201ENST00000551045 634 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC069366.1-201ENST00000583159 838 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AP003117.1-201ENST00000602771 554 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC020910.2-201ENST00000603635 610 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 OR5AC4P-202ENST00000642086 985 ntBASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RBFOX3A6NFN3 MFSD8-242ENST00000641690 4199 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 RN7SKP95-201ENST00000362860 303 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 MIR421-201ENST00000365696 85 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 RAD1P2-201ENST00000446414 663 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 RPL5P32-201ENST00000454085 879 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 RPL30P11-201ENST00000495304 339 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 MTND4LP2-201ENST00000502312 285 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 FTH1P24-201ENST00000503502 462 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 FABP5P6-201ENST00000510588 409 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC026726.1-201ENST00000512859 601 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 OR5M2P-201ENST00000529003 936 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AL049870.4-201ENST00000555741 486 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AL109741.3-201ENST00000561748 592 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 MIR4436B2-201ENST00000581415 91 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 MIR4436B1-201ENST00000583272 91 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AP005264.7-201ENST00000625003 745 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC006504.1-201ENST00000562493 3666 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 AC092162.3-201ENST00000624511 1624 ntBASIC3.29□□□□□ -1.88
RBFOX3A6NFN3 INTS6P1-201ENST00000504674 2530 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms