Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RCCD1A6NED2 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
RCCD1A6NED2 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RCCD1A6NED2 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RCCD1A6NED2 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
RCCD1A6NED2 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RCCD1A6NED2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RCCD1A6NED2 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RCCD1A6NED2 SNORD3E-201ENST00000362899 217 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 SNORA70.5-201ENST00000365519 135 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 SNORD116-11-201ENST00000383882 92 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 Y_RNA.389-201ENST00000383924 113 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 AL023807.1-201ENST00000407932 359 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 ACTR3BP6-201ENST00000422332 1241 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 SUMO2P3-201ENST00000438311 288 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC020550.1-201ENST00000447385 163 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 RPL7P52-201ENST00000449200 742 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 GAPDHP53-201ENST00000458397 924 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC116655.1-201ENST00000508324 901 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC016559.1-201ENST00000511420 199 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 DEFB109D-201ENST00000529497 240 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC068993.1-201ENST00000546724 589 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC011611.6-201ENST00000547483 255 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC125612.1-201ENST00000547580 377 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC004232.1-201ENST00000571388 208 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 AL122023.1-201ENST00000622847 530 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RCCD1A6NED2 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RCCD1A6NED2 AC005592.1-201ENST00000566527 1640 ntBASIC7.29□□□□□ -1.24
RCCD1A6NED2 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.29□□□□□ -1.24
RCCD1A6NED2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 NLRP3P1-201ENST00000622303 1785 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 CAP1P2-201ENST00000417455 1409 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 DHX40P1-201ENST00000588725 1412 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC244517.1-201ENST00000606030 2086 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 U3.11-201ENST00000364476 212 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 RNU6-641P-201ENST00000384006 107 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 MIR649-201ENST00000384843 97 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 RNU6-328P-201ENST00000390887 106 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 Y_RNA.645-201ENST00000391229 102 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 EIF4E2P1-201ENST00000393781 255 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 UBE2V1P2-201ENST00000397758 440 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 RNA5SP177-201ENST00000410122 107 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RCCD1A6NED2 Z93019.1-201ENST00000416450 973 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC108734.1-201ENST00000439549 399 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 CRYGGP-201ENST00000443337 145 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC004801.2-202ENST00000463559 283 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC068781.1-201ENST00000488231 618 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 OR5M6P-201ENST00000530227 937 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 LSM6P2-201ENST00000552208 177 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 AP005119.1-201ENST00000580956 292 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC060771.1-201ENST00000582031 164 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AL591167.1-201ENST00000607321 456 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 PISRT1.1-201ENST00000616930 107 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC010378.1-201ENST00000619270 362 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 AC092608.2-201ENST00000624427 218 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.28□□□□□ -1.24
RCCD1A6NED2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RCCD1A6NED2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms