Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AL031281.1-201ENST00000604049 488 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC011626.1-201ENST00000604710 562 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AL592221.1-201ENST00000605266 382 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 HSPE1P14-201ENST00000605812 302 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC091946.2-201ENST00000606105 291 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC068722.2-201ENST00000618734 544 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC092376.2-201ENST00000622621 4116 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC010266.2-201ENST00000564741 3255 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 BMS1P3-201ENST00000372011 932 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AL645927.1-201ENST00000396783 406 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 NPM1P34-201ENST00000428821 893 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 VDAC1P6-201ENST00000430062 855 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 GAPDHP58-201ENST00000438477 1006 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC005726.1-201ENST00000494679 427 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC012400.1-201ENST00000518452 381 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC105185.1-201ENST00000518705 535 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 CYCSP28-201ENST00000534284 321 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 HIGD1AP17-201ENST00000554576 276 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC114947.2-201ENST00000565748 2125 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC006116.3-201ENST00000592968 361 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC008814.1-201ENST00000603797 406 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 FAM157B-203ENST00000639350 358 ntBASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A3BPQ9Y5P4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC104118.1-201ENST00000607625 1589 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AL034549.2-201ENST00000618285 3373 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 U3.3-201ENST00000362986 216 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 RNU6-757P-201ENST00000410334 100 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 RNU2-21P-201ENST00000410368 188 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 RNU2-28P-201ENST00000410457 189 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 RPL12P9-201ENST00000412942 488 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 MTND4P22-201ENST00000413116 1169 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 COX6CP15-201ENST00000426313 211 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC008065.1-201ENST00000428525 348 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 MTCYBP34-201ENST00000439552 670 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 PRPF38AP1-201ENST00000451976 933 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 MTCO3P2-201ENST00000457365 171 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 RPL7AP6-201ENST00000477943 801 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC093270.2-201ENST00000486157 792 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC004453.1-201ENST00000487895 408 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AP000790.1-201ENST00000528891 737 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 OR4A12P-201ENST00000530847 918 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms