Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 RNU6-623P-201ENST00000363143 105 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AL021407.1-201ENST00000404531 386 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 RNA5SP296-201ENST00000410523 111 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 RPL23AP39-201ENST00000415533 405 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 OR6C64P-201ENST00000419708 825 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 RPL7L1P9-201ENST00000431298 745 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC006335.2-201ENST00000437993 330 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 VDAC2P4-201ENST00000452925 711 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC004129.2-201ENST00000457229 287 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC005532.2-201ENST00000467154 373 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 CCDC75P1-201ENST00000469247 791 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 MTND6P6-201ENST00000478031 263 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 RNA5SP216-201ENST00000516111 123 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 OR5M2P-201ENST00000529003 936 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 OR4A12P-201ENST00000530847 918 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AL163952.1-202ENST00000569625 600 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC012616.1-201ENST00000600294 197 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 MIR6133-201ENST00000617057 108 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AC007494.3-201ENST00000624660 743 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AL034370.1-201ENST00000397254 1590 ntBASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 NCLP2-201ENST00000416078 1462 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AP004607.3-201ENST00000530354 3915 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 RN7SKP149-201ENST00000363008 344 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AL645927.1-201ENST00000396783 406 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 RPL31P52-201ENST00000407532 367 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 RPL23AP27-201ENST00000415161 451 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC016907.1-201ENST00000419483 435 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 NIPA2P1-201ENST00000426223 976 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 MED14P1-201ENST00000430517 648 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 VN1R108P-201ENST00000431580 830 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 MTND4P6-201ENST00000438297 472 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 MTCO1P48-201ENST00000448024 1096 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 SLC31A1P1-201ENST00000451221 567 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 OR52A4P-201ENST00000472867 958 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC072039.1-201ENST00000477611 581 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 COX6B1P2-201ENST00000489624 230 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 RPS6P4-201ENST00000494693 758 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 MTND5P13-201ENST00000513046 1079 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 RNU6-513P-201ENST00000516104 104 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC090424.1-201ENST00000535243 736 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC110743.1-201ENST00000584870 478 ntBASIC5.35□□□□□ -1.55
PCDHGA3Q9Y5H0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms