Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA6Q9Y5G7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA6Q9Y5G7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 CYP1D1P-201ENST00000416662 1433 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 SMG1P6-201ENST00000532337 2930 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AL353796.1-201ENST00000561542 3241 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 RNU4-24P-201ENST00000364565 139 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 SNORA70.6-201ENST00000383934 134 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 RNU6-146P-201ENST00000384602 108 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 MIR223-201ENST00000385204 110 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 GPS2P1-201ENST00000411761 986 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 VN1R21P-201ENST00000426703 765 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC096632.1-201ENST00000427395 310 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 CYCSP12-201ENST00000437729 300 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 CNOT7P2-201ENST00000441051 832 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC019185.1-201ENST00000442718 389 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 MTCO2P18-201ENST00000457151 658 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 RPS23P2-201ENST00000463671 415 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 RPL32P9-201ENST00000487963 407 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC231760.1-201ENST00000498002 260 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 FTH1P24-201ENST00000503502 462 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 MTCO3P7-201ENST00000510008 774 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 Y_RNA.655-201ENST00000515919 96 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 RNU6-941P-201ENST00000516346 108 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 OR7K1P-201ENST00000546439 926 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 HAUS8P1-201ENST00000549005 542 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC090502.2-201ENST00000549267 280 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 LSM6P2-201ENST00000552208 177 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC012435.1-202ENST00000568772 240 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC083899.3-201ENST00000603413 594 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 NANOGP3-201ENST00000605855 286 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AL359535.1-201ENST00000612100 1087 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC098679.5-201ENST00000624394 571 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 AC093849.1-201ENST00000563631 2209 ntBASIC5.31□□□□□ -1.56
PCDHGA6Q9Y5G7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 PANDAR-201ENST00000629595 1506 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 AC006206.1-201ENST00000544842 3387 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 CYCSP45-201ENST00000402289 315 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 AL589647.1-201ENST00000402485 466 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 BTF3L4P1-201ENST00000413813 468 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 AL136231.1-201ENST00000429407 730 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 MTCO3P2-201ENST00000457365 171 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 RN7SL172P-201ENST00000460535 303 ntBASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA6Q9Y5G7 RPS21P4-201ENST00000487122 248 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms