Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RPS26P40-201ENST00000435209 294 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC129850.1-201ENST00000436203 508 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC004865.1-201ENST00000442276 1003 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC090804.1-201ENST00000448870 490 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AL389915.2-201ENST00000454576 441 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC090602.1-201ENST00000469695 252 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 SETP14-201ENST00000497538 873 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC005178.1-201ENST00000508392 440 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC098976.1-201ENST00000513014 541 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6-885P-201ENST00000516607 104 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AP004607.2-201ENST00000533949 322 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC007954.1-201ENST00000554198 494 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 NMNAT1P5-201ENST00000559657 841 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC115085.1-201ENST00000588924 229 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 ELOCP28-201ENST00000590044 317 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC023813.4-201ENST00000607580 580 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 OR1L6-202ENST00000373684 1044 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 SNORA67-201ENST00000384423 137 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 HSPA8P15-201ENST00000401676 786 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL133388.1-201ENST00000404509 287 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 DUTP5-201ENST00000406790 469 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 RPL23AP47-201ENST00000408017 460 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL513175.1-201ENST00000431492 780 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL590103.1-201ENST00000434488 307 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MTCYBP39-201ENST00000437562 491 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MTND2P19-201ENST00000449129 1012 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 DSTNP2-201ENST00000504533 515 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC011352.3-201ENST00000505162 593 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MTCO1P30-201ENST00000515244 580 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6-941P-201ENST00000516346 108 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 HMGB1P40-201ENST00000525121 540 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC018552.1-201ENST00000562099 811 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC093519.1-201ENST00000566109 298 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC104785.1-201ENST00000603220 588 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AP000811.1-201ENST00000603803 651 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC112220.3-201ENST00000605502 502 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL355816.1-201ENST00000607951 118 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 Z95327.3-201ENST00000610385 572 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC005962.2-201ENST00000611427 652 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AP002799.1-201ENST00000623552 423 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC116563.2-201ENST00000624751 535 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC091965.5-201ENST00000624785 342 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 CR392039.4-201ENST00000624968 501 ntBASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB1Q9Y5F3 AC074101.1-201ENST00000637861 241 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms