Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 AC044913.1-201ENST00000557200 430 ntBASIC5.08□□□□□ -1.6
AMFRQ9UKV5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 IMMP1LP3-201ENST00000604197 224 ntBASIC5.08□□□□□ -1.6
AMFRQ9UKV5 COX6CP4-201ENST00000605798 228 ntBASIC5.08□□□□□ -1.6
AMFRQ9UKV5 AP000238.1-201ENST00000608759 426 ntBASIC5.08□□□□□ -1.6
AMFRQ9UKV5 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.08□□□□□ -1.6
AMFRQ9UKV5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 LINC01355-201ENST00000566551 5444 ntBASIC5.08□□□□□ -1.6
AMFRQ9UKV5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 AL672167.1-203ENST00000641299 2975 ntBASIC5.08□□□□□ -1.6
AMFRQ9UKV5 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
AMFRQ9UKV5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC093775.1-201ENST00000624154 1868 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 SNORA51.1-201ENST00000363243 140 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RNA5SP428-201ENST00000365129 132 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RNU6-157P-201ENST00000383957 107 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 Y_RNA.465-201ENST00000384293 102 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 U3.36-201ENST00000408418 213 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC092745.2-202ENST00000411880 369 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AL365203.2-201ENST00000423444 196 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 CDY14P-201ENST00000431260 1014 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 HMGB3P10-201ENST00000434734 572 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 UBE2D3P4-201ENST00000441973 436 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 FAR2P1-206ENST00000449736 709 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 CDY23P-201ENST00000451661 1014 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RNU7-125P-201ENST00000458760 62 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC011979.1-201ENST00000472300 483 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 UBA52P7-201ENST00000486088 380 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 OR5BM1P-201ENST00000512021 366 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RNA5SP464-201ENST00000516251 108 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC135628.1-201ENST00000568867 534 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 BNIP3P4-201ENST00000604946 565 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC011939.3-201ENST00000613686 466 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 SMG1P6-201ENST00000532337 2930 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 AC092435.4-201ENST00000623012 4159 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 SAMMSON-213ENST00000641336 1521 ntBASIC5.07□□□□□ -1.6
AMFRQ9UKV5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
AMFRQ9UKV5 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 AC021755.1-201ENST00000559747 1447 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 NSRP1P1-201ENST00000444067 1693 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 RNU4-4P-201ENST00000364588 130 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 BMS1P3-201ENST00000372011 932 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMFRQ9UKV5 SNORD116-9-201ENST00000384000 95 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 SNORD116-3-201ENST00000384287 95 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 SNORD116-7-201ENST00000384404 95 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 SNORA70-201ENST00000384436 135 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 SNORD116-5-201ENST00000384462 95 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 MIR525-201ENST00000384978 85 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 SNORD96B-201ENST00000386148 79 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 MIR320B1-201ENST00000390209 79 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 ATP5F1P3-201ENST00000397213 657 ntBASIC5.06□□□□□ -1.6
AMFRQ9UKV5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 1087.9 ms