Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 OR4A12P-201ENST00000530847 918 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AL031595.2-201ENST00000624215 19071 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AL442128.2-201ENST00000620246 1824 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 SNORD9-201ENST00000362566 104 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 RPL21P23-201ENST00000446654 460 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 RPS4XP12-201ENST00000461747 709 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 HSPD1P15-201ENST00000505573 1122 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 RNU1-103P-201ENST00000516502 125 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AC007458.1-201ENST00000542812 373 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AC069240.1-201ENST00000548774 375 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AC093524.1-201ENST00000564266 1094 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 MIR4433B-201ENST00000581329 102 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AP001002.2-201ENST00000625137 386 ntBASIC4.88□□□□□ -1.63
SCN11AQ9UI33 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 AC007823.1-201ENST00000569932 1566 ntBASIC4.87□□□□□ -1.63
SCN11AQ9UI33 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 MAPK10-253ENST00000641010 4072 ntBASIC4.87□□□□□ -1.63
SCN11AQ9UI33 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 AL122016.1-201ENST00000403365 367 ntBASIC4.87□□□□□ -1.63
SCN11AQ9UI33 OR51A6P-201ENST00000418680 1004 ntBASIC4.87□□□□□ -1.63
SCN11AQ9UI33 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 AC055839.1-201ENST00000634467 498 ntBASIC4.87□□□□□ -1.63
SCN11AQ9UI33 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN11AQ9UI33 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AC016550.3-201ENST00000515706 767 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 SNORA62.6-201ENST00000606322 83 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AL355365.1-201ENST00000616480 294 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 MIR7975-201ENST00000619350 68 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 Y_RNA.111-201ENST00000363248 100 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 OR6K3-202ENST00000368146 996 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 RPS7P15-201ENST00000415804 584 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 PRDX3P3-201ENST00000447765 522 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 HMGN1P11-201ENST00000508668 303 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AL139089.1-201ENST00000620372 975 ntBASIC4.86□□□□□ -1.63
SCN11AQ9UI33 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN11AQ9UI33 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 PRO1804-201ENST00000623780 2050 ntBASIC4.85□□□□□ -1.63
SCN11AQ9UI33 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.85□□□□□ -1.63
SCN11AQ9UI33 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 KCTD9P3-201ENST00000434597 1169 ntBASIC4.85□□□□□ -1.63
SCN11AQ9UI33 AC012123.2-201ENST00000485809 248 ntBASIC4.85□□□□□ -1.63
SCN11AQ9UI33 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 DUX4L52-201ENST00000549363 777 ntBASIC4.85□□□□□ -1.63
SCN11AQ9UI33 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms