Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 MIR133A2-201ENST00000347538 102 ntBASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 RNA5SP306-201ENST00000411087 107 ntBASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 AC010740.1-201ENST00000417035 684 ntBASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 RANP9-201ENST00000519957 271 ntBASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 MTND1P6-201ENST00000523621 946 ntBASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 AC113192.3-201ENST00000529152 742 ntBASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 AC012417.1-201ENST00000582307 1039 ntBASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 AC002069.2-201ENST00000603580 883 ntBASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIMBP3Q9UFD9 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 AC093663.1-201ENST00000497190 394 ntBASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 IMMP1LP1-201ENST00000605170 488 ntBASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 COX6CP4-201ENST00000605798 228 ntBASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIMBP3Q9UFD9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 SNORA44-201ENST00000384584 132 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 PTGES3P3-201ENST00000511479 482 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 RNA5SP164-201ENST00000516533 110 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 MFSD8-236ENST00000641509 4050 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 RN7SKP186-201ENST00000365371 303 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 RNU6-729P-201ENST00000384399 107 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 RPL21P11-201ENST00000461458 483 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 RNA5SP249-201ENST00000516127 99 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 MAPK10-286ENST00000641208 8747 ntBASIC6.03□□□□□ -1.44
RIMBP3Q9UFD9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 RIOK3P1-201ENST00000418778 1528 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 RNU6-7-201ENST00000364784 107 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 RNU6-8-201ENST00000365467 107 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 AL158071.1-201ENST00000430315 461 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 snoU109.6-201ENST00000516831 118 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 AC090286.3-201ENST00000573133 187 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 AC124312.4-201ENST00000605533 310 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 AP005264.7-201ENST00000625003 745 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
RIMBP3Q9UFD9 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIMBP3Q9UFD9 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RIMBP3Q9UFD9 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms