Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL445423.1-201ENST00000609941 536 ntBASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 AC005962.2-201ENST00000611427 652 ntBASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 MLECP1-201ENST00000615893 709 ntBASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 AC090506.2-201ENST00000624521 419 ntBASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 PNPT1P2-201ENST00000456768 2050 ntBASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS29Q9UBQ0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC093311.1-201ENST00000506586 2021 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 ST13P16-201ENST00000401760 781 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 RWDD4P2-201ENST00000426392 563 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 DPY19L1P2-201ENST00000426647 915 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 RANP8-201ENST00000444720 713 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 VN1R96P-201ENST00000446052 858 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AL500522.2-201ENST00000448562 343 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC010618.1-201ENST00000469924 477 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 RWDD4P1-201ENST00000488019 565 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC010342.1-201ENST00000514047 877 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 RNA5SP179-201ENST00000517284 121 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC138701.1-201ENST00000524329 714 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC091167.4-201ENST00000605079 184 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 RNU4-89P-201ENST00000607443 133 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AP002001.2-201ENST00000529025 1469 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 AC134882.1-201ENST00000603738 1676 ntBASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS29Q9UBQ0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 RNA5SP130-201ENST00000364431 114 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 MIR3074-201ENST00000384885 81 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 RN7SKP56-201ENST00000410513 331 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 RPA2P2-201ENST00000419698 796 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC025884.1-201ENST00000556034 378 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC084757.1-201ENST00000559987 490 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AL360157.1-201ENST00000565962 87 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC010200.2-201ENST00000605098 235 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AL023583.1-201ENST00000607518 1143 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 MIR6716-201ENST00000613413 80 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC004825.2-201ENST00000616634 455 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 AC009229.4-201ENST00000623854 1947 ntBASIC3.76□□□□□ -1.81
VPS29Q9UBQ0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AC009951.1-201ENST00000623674 2614 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AL592437.2-201ENST00000421655 2434 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 OR8G2P-201ENST00000412796 908 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms