Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHD7Q9P2D1 AL121839.2-201ENST00000565058 6943 ntBASIC3.85□□□□□ -1.79
CHD7Q9P2D1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
CHD7Q9P2D1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.85□□□□□ -1.79
CHD7Q9P2D1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.85□□□□□ -1.79
CHD7Q9P2D1 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AC025554.1-201ENST00000505641 188 ntBASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AL390816.3-201ENST00000604527 1066 ntBASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AC097505.1-201ENST00000610199 565 ntBASIC3.84□□□□□ -1.79
CHD7Q9P2D1 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 RNA5SP126-201ENST00000365092 109 ntBASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AC008065.1-201ENST00000428525 348 ntBASIC3.84□□□□□ -1.79
CHD7Q9P2D1 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 MTND6P32-201ENST00000457611 483 ntBASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AL451007.1-201ENST00000595491 289 ntBASIC3.84□□□□□ -1.79
CHD7Q9P2D1 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.84□□□□□ -1.79
CHD7Q9P2D1 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 MRPS21P9-201ENST00000571150 257 ntBASIC3.84□□□□□ -1.8
CHD7Q9P2D1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.84□□□□□ -1.8
CHD7Q9P2D1 AC107993.1-201ENST00000591343 684 ntBASIC3.84□□□□□ -1.8
CHD7Q9P2D1 MIR7106-201ENST00000612419 65 ntBASIC3.84□□□□□ -1.8
CHD7Q9P2D1 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 RPS27AP1-201ENST00000475545 471 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AC108941.1-201ENST00000502853 530 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AC069306.1-201ENST00000507006 843 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AC010486.1-201ENST00000511793 424 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AC023141.12-201ENST00000512399 199 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 HSPA8P17-201ENST00000427029 1382 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AC138409.2-202ENST00000507274 458 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 AC006023.1-201ENST00000603944 259 ntBASIC3.83□□□□□ -1.8
CHD7Q9P2D1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.83□□□□□ -1.8
CHD7Q9P2D1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 RNA5SP187-201ENST00000384400 119 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 RNA5SP80-201ENST00000410475 111 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 RNA5SP306-201ENST00000411087 107 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 AL158071.1-201ENST00000430315 461 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 RPL23AP89-201ENST00000439324 255 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 AC118465.1-201ENST00000513820 1271 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 MIR4433B-201ENST00000581329 102 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 AL359757.2-201ENST00000624309 274 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 AC010740.1-201ENST00000417035 684 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 AC092747.2-201ENST00000545069 983 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 AP000553.6-201ENST00000641242 118 ntBASIC3.82□□□□□ -1.8
CHD7Q9P2D1 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms