Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 GCSHP4-201ENST00000538792 439 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 OR11J2P-201ENST00000555298 907 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC018552.3-201ENST00000567416 561 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC006116.3-201ENST00000592968 361 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC087763.1-201ENST00000603391 286 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC023510.2-201ENST00000622162 746 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC112694.2-201ENST00000623697 768 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AP003476.1-201ENST00000623984 516 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AP003485.1-201ENST00000625093 753 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 LINC01808-202ENST00000641680 1116 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AP001486.2-201ENST00000561652 5113 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AL049555.1-201ENST00000562834 1933 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AL645568.2-201ENST00000432815 1337 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 U3.25-201ENST00000391209 220 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 RPS20P14-201ENST00000412545 360 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 TPTE2P3-201ENST00000441562 1189 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 SETP6-201ENST00000479329 568 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC110760.3-202ENST00000515177 371 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 RNU2-30P-201ENST00000516209 141 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC104229.1-201ENST00000561364 255 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 SUMO2P14-201ENST00000604488 293 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC025175.1-201ENST00000606482 759 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AL121652.1-201ENST00000608851 448 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AP000864.1-201ENST00000609424 650 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AL050303.3-201ENST00000613704 284 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC004825.2-201ENST00000616634 455 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC078880.5-201ENST00000617845 421 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AL035461.2-201ENST00000619201 524 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC006065.6-201ENST00000625201 545 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC099654.9-201ENST00000637055 678 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 AC093311.1-201ENST00000506586 2021 ntBASIC4.19□□□□□ -1.74
NDE1Q9NXR1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.19□□□□□ -1.74
NDE1Q9NXR1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC053481.2-202ENST00000582394 1500 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RNU6-354P-201ENST00000383862 107 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RNU6-610P-201ENST00000384264 107 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RNA5SP332-201ENST00000391063 115 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 CHMP1B2P-201ENST00000399581 597 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 SNORA3C-201ENST00000408792 125 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 RNU2-17P-201ENST00000410290 190 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.18□□□□□ -1.74
NDE1Q9NXR1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 MTND4P11-201ENST00000417020 1058 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 BX510359.2-201ENST00000417920 305 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 SFR1P2-201ENST00000421841 730 ntBASIC4.18□□□□□ -1.74
NDE1Q9NXR1 EIF1P3-201ENST00000423841 334 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms