Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RNA5SP284-201ENST00000384547 118 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC007066.1-201ENST00000392902 381 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 PRRC2CP1-201ENST00000404428 159 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 RPL23AP39-201ENST00000415533 405 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 BMS1P17-202ENST00000416720 316 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC233981.1-201ENST00000423224 461 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 CENPIP1-201ENST00000425713 902 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AKR1B10P1-201ENST00000425765 942 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC002504.1-201ENST00000438281 691 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 RPL18AP17-201ENST00000455326 198 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC092754.1-201ENST00000472975 479 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC116337.2-201ENST00000477662 156 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC004069.2-201ENST00000505438 1114 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 ENPP7P11-201ENST00000505915 627 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 MTND6P2-201ENST00000512226 524 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 RPS27AP18-201ENST00000515536 459 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 RNU6-488P-201ENST00000515918 99 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 RN7SKP99-201ENST00000517028 307 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 NRBF2P4-201ENST00000520874 850 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC239860.2-201ENST00000525886 270 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 PSMB7P1-201ENST00000556349 514 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC010547.6-201ENST00000571789 193 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 MIR4505-201ENST00000582238 73 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC078795.2-201ENST00000602835 1252 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 MIR7844-201ENST00000616161 122 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 MTND5P24-201ENST00000438892 1767 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 CR383658.2-201ENST00000547576 1525 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 MTND4P26-201ENST00000415971 1359 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 OR9K1P-201ENST00000326513 941 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 RNU1-146P-201ENST00000364015 165 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 RNA5SP88-201ENST00000365560 109 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 RNU6-444P-201ENST00000383988 108 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 MIR621-201ENST00000384919 96 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 SNORA48.4-201ENST00000391089 134 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 DBIP1-201ENST00000401435 260 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 RNU2-28P-201ENST00000410457 189 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AC004022.2-201ENST00000413824 193 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AC009237.2-201ENST00000421358 284 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AC009965.2-201ENST00000425328 970 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 MTND6P12-201ENST00000428247 522 ntBASIC4.97□□□□□ -1.61
RLIMQ9NVW2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.97□□□□□ -1.61
RLIMQ9NVW2 YWHAZP8-201ENST00000436935 731 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms