Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 OR5D15P-201ENST00000531671 942 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 OR4U1P-201ENST00000554958 912 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 AC012409.3-201ENST00000611343 981 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 MIR6886-201ENST00000619864 61 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 AL773545.4-201ENST00000637262 310 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 AL513478.4-201ENST00000641636 310 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 OR5AC4P-202ENST00000642086 985 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 SEPT7P7-201ENST00000420492 1301 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 CIR1P2-201ENST00000514821 1342 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 MAPK10-253ENST00000641010 4072 ntBASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTNNBIP1Q9NSA3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AL592148.3-201ENST00000608771 2646 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 RNA5SP87-201ENST00000384155 118 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 SNORD65-201ENST00000391079 73 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 MIR1178-201ENST00000408396 91 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 RN7SKP229-201ENST00000410465 302 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC119751.6-201ENST00000416712 186 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 P2RY10P2-201ENST00000416730 913 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 USP12PY-201ENST00000427677 1064 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC011742.1-201ENST00000431448 434 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 RPL23AP52-201ENST00000439311 478 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 VN1R25P-201ENST00000443385 738 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 YWHAQP9-201ENST00000445891 512 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 PHBP16-201ENST00000446318 950 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 HMGB1P16-201ENST00000447155 540 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 EIF2S2P2-201ENST00000447161 982 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC016724.1-201ENST00000453215 421 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 VN1R40P-201ENST00000455196 941 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 RPS20P4-201ENST00000461659 355 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 STRADBP1-201ENST00000478954 1281 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 RPL31P61-201ENST00000496160 376 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC007599.1-201ENST00000568688 1174 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 MIR4270-201ENST00000581799 70 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC012417.1-201ENST00000582307 1039 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 HMGB1P50-201ENST00000605814 607 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC090510.2-201ENST00000617465 629 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AL445528.2-201ENST00000620582 470 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AC002044.3-201ENST00000623314 541 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 AL359715.5-201ENST00000623431 443 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 GABPAP-201ENST00000419271 1356 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 RARSP1-201ENST00000542842 1418 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 DHX40P1-201ENST00000588725 1412 ntBASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTNNBIP1Q9NSA3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 OR4K17-201ENST00000315543 1032 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 RNU1-14P-201ENST00000362759 152 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 RNU6-328P-201ENST00000390887 106 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 RN7SKP235-201ENST00000410662 305 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 RPA2P2-201ENST00000419698 796 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 SERPINA7P1-201ENST00000443077 631 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 RPL7P32-201ENST00000457119 744 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 RPL21P103-201ENST00000479921 488 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 RPL23AP72-201ENST00000492447 435 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 AC078817.1-201ENST00000492623 435 ntBASIC3.34□□□□□ -1.87
CTNNBIP1Q9NSA3 RPL5P23-201ENST00000496040 868 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms