Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC012020.1-201ENST00000624541 1728 ntBASIC2.9□□□□□ -1.95
SND1-IT1Q9HBX3 AL356489.2-201ENST00000566968 3528 ntBASIC2.9□□□□□ -1.95
SND1-IT1Q9HBX3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.9□□□□□ -1.95
SND1-IT1Q9HBX3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.9□□□□□ -1.95
SND1-IT1Q9HBX3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SND1-IT1Q9HBX3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC011978.2-201ENST00000569835 2054 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 XPOTP1-201ENST00000443317 2398 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC083899.2-201ENST00000423285 1376 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MFSD8-242ENST00000641690 4199 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 OR52E6-202ENST00000379946 954 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 RNU6-171P-201ENST00000384354 107 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MIR153-1-201ENST00000384914 90 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 RNA5SP332-201ENST00000391063 115 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MIR1303-201ENST00000408625 86 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 NUP35P2-201ENST00000416748 943 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL161631.1-201ENST00000417933 486 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC092832.1-201ENST00000422934 400 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MTND2P11-201ENST00000423638 648 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL732292.1-201ENST00000426692 226 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 FTH1P6-201ENST00000430768 320 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL391987.1-201ENST00000441025 200 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 RPS15AP29-201ENST00000445539 400 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 HMGB1P48-201ENST00000446155 598 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MTND2P25-201ENST00000449028 610 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 CEACAMP6-201ENST00000452007 574 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC133473.1-201ENST00000455173 299 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC006517.1-201ENST00000480485 328 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 RN7SKP276-201ENST00000516242 268 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 RNA5SP92-201ENST00000516437 110 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 RN7SKP283-201ENST00000517197 270 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC103833.1-201ENST00000517442 172 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC026616.1-201ENST00000523157 525 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC010306.1-201ENST00000523223 1117 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 SOX5P1-201ENST00000524155 1127 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC008033.2-201ENST00000542626 177 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 HAUS8P1-201ENST00000549005 542 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC107016.1-201ENST00000550463 337 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 CKS1BP1-201ENST00000555221 240 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC233266.2-201ENST00000567067 528 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC005034.4-201ENST00000603612 899 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC135178.6-201ENST00000605314 398 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC113194.1-201ENST00000606037 500 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 OR2BH1P-201ENST00000608850 864 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL645927.2-201ENST00000618350 349 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 C2orf27A-204ENST00000623058 969 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AL359715.5-201ENST00000623431 443 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 AC008785.1-201ENST00000624475 456 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 DCAF13P1-201ENST00000495256 1330 ntBASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.89□□□□□ -1.95
SND1-IT1Q9HBX3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms