Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC106872.4-201ENST00000510050 523 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 KHDC1P1-201ENST00000511053 508 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 SCARNA21.2-201ENST00000516600 166 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AC025881.1-201ENST00000518851 512 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AC068587.4-201ENST00000533893 186 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AL121594.2-201ENST00000541658 472 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AC027807.1-201ENST00000559921 996 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 EIF1P4-201ENST00000572664 335 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AC011445.2-201ENST00000599274 173 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 uc_338.26-201ENST00000612659 160 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 MIR6886-201ENST00000619864 61 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 AP001005.3-201ENST00000622049 129 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 MTND5P28-201ENST00000438005 1594 ntBASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM55Q9BYV6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC005332.5-201ENST00000591222 2919 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC107027.3-201ENST00000565095 3473 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 RNU105B-201ENST00000364478 208 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 RNU6-1215P-201ENST00000384441 102 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 ARF4P3-201ENST00000397387 509 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 RN7SKP229-201ENST00000410465 302 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 NDUFS5P5-201ENST00000437256 321 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC239367.2-201ENST00000447309 705 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 MTCO1P27-201ENST00000448269 226 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 SDC4P-201ENST00000453285 601 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 TRBV26-201ENST00000456572 344 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 snoU13.7-201ENST00000459220 104 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 RPL7P22-201ENST00000466005 733 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 RN7SL174P-201ENST00000475578 289 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC021678.1-201ENST00000505195 936 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 MTND1P5-201ENST00000517906 940 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC074029.1-201ENST00000552531 1044 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 TXNP4-201ENST00000575018 310 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 MIR5186-201ENST00000577504 120 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 BNIP3P23-201ENST00000599655 511 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AL133338.2-201ENST00000604292 736 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 RFPL4AP6-201ENST00000616792 846 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AL357080.1-201ENST00000617394 239 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AL512652.1-201ENST00000619006 500 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 GDI2P1-201ENST00000429312 1336 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 AL133243.2-201ENST00000610331 1621 ntBASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms