Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNU6-553P-201ENST00000364047 96 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SUGT1P1-201ENST00000379514 476 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SNORD116-9-201ENST00000384000 95 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SNORD116-3-201ENST00000384287 95 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SNORD116-7-201ENST00000384404 95 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SNORD116-5-201ENST00000384462 95 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC104333.2-201ENST00000422630 192 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL606662.1-201ENST00000445763 553 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 NOP56P2-201ENST00000447491 769 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL591623.2-201ENST00000449978 222 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RPL23AP15-201ENST00000450202 459 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RPL31P3-201ENST00000458430 332 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC018638.3-201ENST00000461273 132 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC104689.1-201ENST00000473356 768 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 MTND3P7-201ENST00000474435 343 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SIAH1P1-201ENST00000479411 923 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC023424.1-201ENST00000496058 459 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 GTF2F2P1-201ENST00000511083 675 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RNU6-941P-201ENST00000516346 108 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RN7SKP31-201ENST00000516354 278 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RNU6-759P-201ENST00000516740 103 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 MTCO1P49-201ENST00000523429 802 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC126177.5-201ENST00000549599 178 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL049779.2-201ENST00000553847 315 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC093591.2-201ENST00000565254 3843 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC017100.2-201ENST00000584628 355 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC103881.1-201ENST00000603476 538 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC072039.2-201ENST00000608883 439 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL121890.2-201ENST00000617644 465 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL607023.1-201ENST00000620045 248 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC073530.2-201ENST00000623987 261 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 MKKS-204ENST00000639674 192 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC107982.1-201ENST00000507171 1300 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 THAP12P5-201ENST00000405864 2275 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC011447.7-201ENST00000624228 1590 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 RNU6-115P-201ENST00000364310 107 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 RNA5SP90-201ENST00000364801 99 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 Y_RNA.408-201ENST00000383987 102 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 RNU6-1200P-201ENST00000384162 107 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 RNU6-253P-201ENST00000384730 105 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AP000534.2-201ENST00000412729 568 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 BOLA3P4-201ENST00000418151 400 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 QRSL1P2-201ENST00000418582 964 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms