Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU6-97P-201ENST00000363387 104 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 MRPL42P2-201ENST00000403169 426 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RNU6-248P-201ENST00000410720 107 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC116036.1-201ENST00000412199 367 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RAD23BP2-201ENST00000416003 1207 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 C1DP2-201ENST00000418167 426 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC004690.1-201ENST00000418216 328 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RPS15AP30-201ENST00000420976 390 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC007742.1-201ENST00000425789 329 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 ELOCP26-201ENST00000436067 329 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 MTCO2P3-201ENST00000442543 421 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RANP2-201ENST00000456833 229 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RPS20P24-201ENST00000457473 361 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 RPS3AP17-201ENST00000472594 777 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC067852.4-201ENST00000590314 478 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC011468.4-201ENST00000603942 409 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC006924.1-201ENST00000610750 559 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC013476.2-201ENST00000614456 459 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC104010.1-201ENST00000616889 150 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 MAPK10-304ENST00000641341 3984 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC008627.1-201ENST00000517511 1704 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 AC068769.1-201ENST00000474767 2426 ntBASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRAIPQ9BWF2 FARSBP1-201ENST00000435808 1778 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC091046.3-201ENST00000631455 1574 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 RNA5SP478-201ENST00000364657 115 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 RNA5SP223-201ENST00000365174 120 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 SNORD115.1-201ENST00000391109 76 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 MTND4LP20-201ENST00000402379 270 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AL049693.1-201ENST00000402760 611 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 RNU2-8P-201ENST00000410727 190 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 ARPC3P1-201ENST00000437218 533 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC098824.1-201ENST00000453565 980 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 VPS25P1-201ENST00000455691 508 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AP1S2P1-201ENST00000457344 379 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC098847.1-201ENST00000473094 348 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC093853.1-201ENST00000515689 483 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 RNA5SP271-201ENST00000516700 88 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AP003467.2-201ENST00000520175 319 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 IGKV3D-34-201ENST00000522638 302 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 RPA2P3-201ENST00000533268 770 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC098614.4-201ENST00000607601 462 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms